Model info
| Transcription factor | Hivep1 | ||||||||
| Model | ZEP1_MOUSE.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 12 | ||||||||
| Quality | D | ||||||||
| Consensus | KGGGAAATCCCn | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 10 | ||||||||
| TF family | Factors with multiple dispersed zinc fingers{2.3.4} | ||||||||
| TF subfamily | HIV EP-factors{2.3.4.5} | ||||||||
| MGI | 96100 | ||||||||
| EntrezGene | |||||||||
| UniProt ID | ZEP1_MOUSE | ||||||||
| UniProt AC | Q03172 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.599 | 1.303 | 2.007 | 6.092 |
| 02 | 0.0 | 0.0 | 10.0 | 0.0 |
| 03 | 2.676 | 0.0 | 7.324 | 0.0 |
| 04 | 2.817 | 0.0 | 7.183 | 0.0 |
| 05 | 7.183 | 0.0 | 2.817 | 0.0 |
| 06 | 10.0 | 0.0 | 0.0 | 0.0 |
| 07 | 7.183 | 0.0 | 2.817 | 0.0 |
| 08 | 1.268 | 0.0 | 0.0 | 8.732 |
| 09 | 0.0 | 8.028 | 1.268 | 0.704 |
| 10 | 0.0 | 10.0 | 0.0 | 0.0 |
| 11 | 0.0 | 8.592 | 0.0 | 1.408 |
| 12 | 0.951 | 4.331 | 2.359 | 2.359 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.963 | -0.493 | -0.175 | 0.774 |
| 02 | -1.676 | -1.676 | 1.235 | -1.676 |
| 03 | 0.056 | -1.676 | 0.943 | -1.676 |
| 04 | 0.098 | -1.676 | 0.925 | -1.676 |
| 05 | 0.925 | -1.676 | 0.098 | -1.676 |
| 06 | 1.235 | -1.676 | -1.676 | -1.676 |
| 07 | 0.925 | -1.676 | 0.098 | -1.676 |
| 08 | -0.512 | -1.676 | -1.676 | 1.107 |
| 09 | -1.676 | 1.029 | -0.512 | -0.877 |
| 10 | -1.676 | 1.235 | -1.676 | -1.676 |
| 11 | -1.676 | 1.092 | -1.676 | -0.438 |
| 12 | -0.701 | 0.467 | -0.047 | -0.047 |