Model info
Transcription factorTwist1
ModelTWST1_MOUSE.H10MO.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length10
Quality
D
ConsensushMCCAGGTGG
wAUC
Best AUC
Benchmark datasets
Aligned words5
TF familyTal-related factors{1.2.3}
TF subfamilyTwist-like factors{1.2.3.2}
MGI98872
EntrezGene22160
UniProt IDTWST1_MOUSE
UniProt ACP26687
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.9252
0.0005 5.6451
0.0001 6.9566
PCM
ACGT
012.1952.1950.00.61
021.222.6831.0980.0
030.03.9021.0980.0
040.05.00.00.0
055.00.00.00.0
060.00.03.781.22
070.00.05.00.0
080.00.00.05.0
090.00.05.00.0
100.00.02.9272.073
PWM
ACGT
010.4520.452-1.413-0.49
02-0.0190.624-0.097-1.413
03-1.4130.958-0.097-1.413
04-1.4131.185-1.413-1.413
051.185-1.413-1.413-1.413
06-1.413-1.4130.929-0.019
07-1.413-1.4131.185-1.413
08-1.413-1.413-1.4131.185
09-1.413-1.4131.185-1.413
10-1.413-1.4130.7010.404