Model info
Transcription factorOtx2
ModelOTX2_MOUSE.H10MO.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length15
Quality
C
ConsensusdhdMhvSGATTARvd
wAUC
Best AUC
Benchmark datasets
Aligned words25
TF familyPaired-related HD factors{3.1.3}
TF subfamilyOTX{3.1.3.17}
MGI97451
EntrezGene
UniProt IDOTX2_MOUSE
UniProt ACP80206
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.8831
0.0005 5.6401
0.0001 7.1941
PCM
ACGT
013.6022.53510.9657.764
027.6845.0162.9889.178
035.872.0287.8979.071
0413.8747.0433.9490.0
0510.7793.9492.9887.15
066.9375.9769.9252.028
071.9213.94917.9291.067
082.9880.021.8770.0
0923.7981.0670.00.0
100.00.00.024.866
110.960.00.023.905
1224.8660.00.00.0
1312.1662.1348.6441.921
1411.7393.9495.9763.202
154.1623.9498.5388.217
PWM
ACGT
01-0.466-0.7430.5170.199
020.19-0.188-0.6160.352
03-0.051-0.9080.2150.341
040.7380.111-0.39-2.168
050.501-0.39-0.6160.125
060.098-0.0350.424-0.908
07-0.947-0.390.982-1.322
08-0.616-2.1681.173-2.168
091.254-1.322-2.168-2.168
10-2.168-2.168-2.1681.297
11-1.381-2.168-2.1681.258
121.297-2.168-2.168-2.168
130.614-0.8710.297-0.947
140.58-0.39-0.035-0.561
15-0.346-0.390.2860.251