Model info
| Transcription factor | MEF2C | ||||||||
| Model | MEF2C_HUMAN.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 13 | ||||||||
| Quality | C | ||||||||
| Consensus | ddYTATTTWWRRh | ||||||||
| wAUC | 0.8687673237484923 | ||||||||
| Best AUC | 0.8687673237484924 | ||||||||
| Benchmark datasets | 1 | ||||||||
| Aligned words | 498 | ||||||||
| TF family | Regulators of differentiation{5.1.1} | ||||||||
| TF subfamily | MEF-2{5.1.1.1} | ||||||||
| HGNC | 6996 | ||||||||
| EntrezGene | 4208 | ||||||||
| UniProt ID | MEF2C_HUMAN | ||||||||
| UniProt AC | Q06413 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 148.518 | 24.633 | 127.348 | 197.812 |
| 02 | 66.485 | 44.983 | 158.135 | 228.708 |
| 03 | 20.749 | 339.829 | 32.629 | 105.104 |
| 04 | 1.627 | 21.439 | 0.0 | 475.245 |
| 05 | 470.949 | 4.332 | 2.578 | 20.451 |
| 06 | 37.834 | 0.0 | 1.048 | 459.429 |
| 07 | 34.199 | 2.476 | 3.325 | 458.311 |
| 08 | 13.068 | 13.022 | 2.582 | 469.64 |
| 09 | 80.753 | 47.903 | 9.369 | 360.287 |
| 10 | 66.205 | 18.116 | 53.679 | 360.311 |
| 11 | 262.644 | 0.745 | 232.248 | 2.673 |
| 12 | 93.11 | 30.485 | 308.868 | 65.847 |
| 13 | 203.952 | 137.937 | 64.1 | 92.323 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.174 | -1.572 | 0.022 | 0.458 |
| 02 | -0.617 | -0.997 | 0.236 | 0.602 |
| 03 | -1.733 | 0.996 | -1.306 | -0.168 |
| 04 | -3.681 | -1.702 | -4.397 | 1.33 |
| 05 | 1.321 | -3.065 | -3.419 | -1.746 |
| 06 | -1.164 | -4.397 | -3.882 | 1.296 |
| 07 | -1.261 | -3.444 | -3.253 | 1.294 |
| 08 | -2.155 | -2.158 | -3.418 | 1.318 |
| 09 | -0.427 | -0.936 | -2.447 | 1.054 |
| 10 | -0.621 | -1.858 | -0.826 | 1.054 |
| 11 | 0.739 | -4.005 | 0.617 | -3.396 |
| 12 | -0.287 | -1.37 | 0.901 | -0.627 |
| 13 | 0.488 | 0.101 | -0.653 | -0.295 |