Transcription factor | GFI1B | ||||||||
Model | GFI1B_HUMAN.H10MO.C | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 11 | ||||||||
Quality | C | ||||||||
Consensus | hKYMSTGATTb | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 74 | ||||||||
TF family | More than 3 adjacent zinc finger factors{2.3.3} | ||||||||
TF subfamily | GFI1 factors{2.3.3.21} | ||||||||
HGNC | 4238 | ||||||||
EntrezGene | 8328 | ||||||||
UniProt ID | GFI1B_HUMAN | ||||||||
UniProt AC | Q5VTD9 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 23.529 | 9.412 | 5.826 | 35.182 |
02 | 8.179 | 2.129 | 54.79 | 8.852 |
03 | 7.283 | 47.955 | 6.05 | 12.661 |
04 | 39.72 | 19.384 | 2.017 | 12.829 |
05 | 1.12 | 21.289 | 47.507 | 4.034 |
06 | 3.025 | 1.008 | 2.129 | 67.787 |
07 | 0.0 | 0.0 | 73.95 | 0.0 |
08 | 72.941 | 1.008 | 0.0 | 0.0 |
09 | 2.241 | 1.008 | 0.0 | 70.7 |
10 | 1.008 | 0.0 | 0.0 | 72.941 |
11 | 7.563 | 13.053 | 14.062 | 39.272 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.229 | -0.623 | -1.042 | 0.617 |
02 | -0.748 | -1.809 | 1.049 | -0.678 |
03 | -0.85 | 0.919 | -1.01 | -0.354 |
04 | 0.735 | 0.045 | -1.845 | -0.341 |
05 | -2.187 | 0.134 | 0.91 | -1.343 |
06 | -1.562 | -2.239 | -1.809 | 1.258 |
07 | -2.901 | -2.901 | 1.344 | -2.901 |
08 | 1.331 | -2.239 | -2.901 | -2.901 |
09 | -1.775 | -2.239 | -2.901 | 1.3 |
10 | -2.239 | -2.901 | -2.901 | 1.331 |
11 | -0.817 | -0.325 | -0.256 | 0.724 |