Model info
| Transcription factor | Ar | ||||||||
| Model | ANDR_MOUSE.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 16 | ||||||||
| Quality | B | ||||||||
| Consensus | RGWWCWbndhGTdCYd | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 131 | ||||||||
| TF family | Steroid hormone receptors (NR3){2.1.1} | ||||||||
| TF subfamily | GR-like receptors (NR3C){2.1.1.1} | ||||||||
| MGI | 88064 | ||||||||
| EntrezGene | 11835 | ||||||||
| UniProt ID | ANDR_MOUSE | ||||||||
| UniProt AC | P19091 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 40.339 | 4.693 | 72.893 | 12.075 |
| 02 | 7.308 | 4.426 | 118.266 | 0.0 |
| 03 | 54.623 | 0.0 | 30.252 | 45.125 |
| 04 | 98.829 | 0.739 | 12.234 | 18.198 |
| 05 | 2.053 | 123.596 | 3.531 | 0.821 |
| 06 | 94.418 | 4.68 | 14.01 | 16.891 |
| 07 | 11.7 | 35.444 | 50.141 | 32.716 |
| 08 | 41.535 | 25.095 | 42.833 | 20.538 |
| 09 | 51.454 | 12.137 | 40.37 | 26.039 |
| 10 | 22.49 | 32.898 | 6.725 | 67.887 |
| 11 | 2.34 | 5.912 | 120.27 | 1.478 |
| 12 | 13.294 | 1.888 | 12.465 | 102.352 |
| 13 | 31.812 | 2.217 | 37.593 | 58.377 |
| 14 | 17.466 | 104.118 | 2.504 | 5.912 |
| 15 | 10.913 | 35.5 | 7.382 | 76.206 |
| 16 | 31.723 | 15.503 | 24.897 | 57.877 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.209 | -1.741 | 0.788 | -0.931 |
| 02 | -1.375 | -1.788 | 1.265 | -3.322 |
| 03 | 0.504 | -3.322 | -0.069 | 0.318 |
| 04 | 1.088 | -2.847 | -0.919 | -0.552 |
| 05 | -2.333 | 1.309 | -1.96 | -2.806 |
| 06 | 1.043 | -1.744 | -0.795 | -0.622 |
| 07 | -0.959 | 0.084 | 0.421 | 0.006 |
| 08 | 0.237 | -0.248 | 0.267 | -0.438 |
| 09 | 0.446 | -0.926 | 0.21 | -0.213 |
| 10 | -0.352 | 0.012 | -1.446 | 0.718 |
| 11 | -2.249 | -1.554 | 1.282 | -2.527 |
| 12 | -0.843 | -2.385 | -0.902 | 1.122 |
| 13 | -0.021 | -2.284 | 0.141 | 0.57 |
| 14 | -0.59 | 1.139 | -2.204 | -1.554 |
| 15 | -1.022 | 0.085 | -1.366 | 0.831 |
| 16 | -0.023 | -0.701 | -0.256 | 0.561 |