Transcription factor | ZNF350 | ||||||||
Model | ZN350_HUMAN.H10MO.C | ||||||||
Model type | Mononucleotide PWM | ||||||||
LOGO | |||||||||
LOGO (reverse complement) | |||||||||
Origin | HOCOMOCO v9 | ||||||||
Model length | 24 | ||||||||
Quality | C | ||||||||
Consensus | nSGGGvSRMAGnnvKTTGKbKSCn | ||||||||
wAUC | |||||||||
Best AUC | |||||||||
Benchmark datasets | |||||||||
Aligned words | 15 | ||||||||
TF family | More than 3 adjacent zinc finger factors{2.3.3} | ||||||||
TF subfamily | ZNF350-like factors{2.3.3.30} | ||||||||
HGNC | 16656 | ||||||||
EntrezGene | 59348 | ||||||||
UniProt ID | ZN350_HUMAN | ||||||||
UniProt AC | Q9GZX5 | ||||||||
Comment | |||||||||
Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
Standard thresholds |
|
A | C | G | T | |
---|---|---|---|---|
01 | 8.271 | 1.676 | 3.378 | 1.676 |
02 | 2.872 | 7.34 | 4.787 | 0.0 |
03 | 1.702 | 0.0 | 13.298 | 0.0 |
04 | 0.957 | 0.0 | 13.298 | 0.745 |
05 | 0.957 | 0.0 | 12.128 | 1.915 |
06 | 4.681 | 3.83 | 5.532 | 0.957 |
07 | 3.83 | 5.638 | 5.532 | 0.0 |
08 | 2.872 | 0.0 | 9.468 | 2.66 |
09 | 2.872 | 10.426 | 0.957 | 0.745 |
10 | 12.34 | 1.702 | 0.0 | 0.957 |
11 | 5.532 | 0.0 | 9.468 | 0.0 |
12 | 3.83 | 0.957 | 6.383 | 3.83 |
13 | 2.66 | 2.872 | 4.787 | 4.681 |
14 | 5.745 | 3.617 | 4.681 | 0.957 |
15 | 0.957 | 0.957 | 3.83 | 9.255 |
16 | 0.0 | 4.787 | 0.0 | 10.213 |
17 | 0.0 | 0.957 | 0.0 | 14.043 |
18 | 0.0 | 0.0 | 10.319 | 4.681 |
19 | 0.0 | 1.702 | 4.681 | 8.617 |
20 | 0.745 | 1.915 | 5.745 | 6.596 |
21 | 0.745 | 1.915 | 8.511 | 3.83 |
22 | 0.957 | 9.468 | 3.83 | 0.745 |
23 | 0.0 | 13.298 | 0.745 | 0.957 |
24 | 1.862 | 7.606 | 3.67 | 1.862 |
A | C | G | T | |
---|---|---|---|---|
01 | 0.704 | -0.632 | -0.088 | -0.632 |
02 | -0.221 | 0.594 | 0.211 | -1.878 |
03 | -0.621 | -1.878 | 1.15 | -1.878 |
04 | -0.996 | -1.878 | 1.15 | -1.136 |
05 | -0.996 | -1.878 | 1.062 | -0.535 |
06 | 0.191 | 0.018 | 0.338 | -0.996 |
07 | 0.018 | 0.355 | 0.338 | -1.878 |
08 | -0.221 | -1.878 | 0.829 | -0.283 |
09 | -0.221 | 0.919 | -0.996 | -1.136 |
10 | 1.079 | -0.621 | -1.878 | -0.996 |
11 | 0.338 | -1.878 | 0.829 | -1.878 |
12 | 0.018 | -0.996 | 0.467 | 0.018 |
13 | -0.283 | -0.221 | 0.211 | 0.191 |
14 | 0.372 | -0.03 | 0.191 | -0.996 |
15 | -0.996 | -0.996 | 0.018 | 0.808 |
16 | -1.878 | 0.211 | -1.878 | 0.9 |
17 | -1.878 | -0.996 | -1.878 | 1.201 |
18 | -1.878 | -1.878 | 0.91 | 0.191 |
19 | -1.878 | -0.621 | 0.191 | 0.742 |
20 | -1.136 | -0.535 | 0.372 | 0.496 |
21 | -1.136 | -0.535 | 0.73 | 0.018 |
22 | -0.996 | 0.829 | 0.018 | -1.136 |
23 | -1.878 | 1.15 | -1.136 | -0.996 |
24 | -0.556 | 0.627 | -0.018 | -0.556 |