Model info
| Transcription factor | Znf143 | ||||||||
| Model | ZN143_MOUSE.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 22 | ||||||||
| Quality | D | ||||||||
| Consensus | KMddKGMAKKMTGGGWRdKSbh | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 26 | ||||||||
| TF family | More than 3 adjacent zinc finger factors{2.3.3} | ||||||||
| TF subfamily | ZNF76-like factors{2.3.3.28} | ||||||||
| MGI | 1277969 | ||||||||
| EntrezGene | 20841 | ||||||||
| UniProt ID | ZN143_MOUSE | ||||||||
| UniProt AC | O70230 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.0 | 3.891 | 15.418 | 6.841 |
| 02 | 3.891 | 17.202 | 1.909 | 3.148 |
| 03 | 11.898 | 1.239 | 9.196 | 3.818 |
| 04 | 11.155 | 3.148 | 4.882 | 6.965 |
| 05 | 1.909 | 0.0 | 13.013 | 11.228 |
| 06 | 0.0 | 0.0 | 26.15 | 0.0 |
| 07 | 5.726 | 18.515 | 1.909 | 0.0 |
| 08 | 23.126 | 3.024 | 0.0 | 0.0 |
| 09 | 0.0 | 3.818 | 4.685 | 17.648 |
| 10 | 0.0 | 3.818 | 10.113 | 12.22 |
| 11 | 9.544 | 13.706 | 2.9 | 0.0 |
| 12 | 0.0 | 0.0 | 1.909 | 24.241 |
| 13 | 0.0 | 0.0 | 26.15 | 0.0 |
| 14 | 0.0 | 0.0 | 26.15 | 0.0 |
| 15 | 3.818 | 0.0 | 19.928 | 2.404 |
| 16 | 19.433 | 0.991 | 1.909 | 3.818 |
| 17 | 13.013 | 5.304 | 7.833 | 0.0 |
| 18 | 7.635 | 1.909 | 8.824 | 7.782 |
| 19 | 3.148 | 3.148 | 3.818 | 16.037 |
| 20 | 6.965 | 9.122 | 10.063 | 0.0 |
| 21 | 1.909 | 7.213 | 5.924 | 11.104 |
| 22 | 9.939 | 6.172 | 2.157 | 7.883 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -2.199 | -0.446 | 0.792 | 0.04 |
| 02 | -0.446 | 0.896 | -0.993 | -0.618 |
| 03 | 0.548 | -1.275 | 0.309 | -0.462 |
| 04 | 0.487 | -0.618 | -0.255 | 0.057 |
| 05 | -0.993 | -2.199 | 0.632 | 0.493 |
| 06 | -2.199 | -2.199 | 1.299 | -2.199 |
| 07 | -0.117 | 0.967 | -0.993 | -2.199 |
| 08 | 1.18 | -0.65 | -2.199 | -2.199 |
| 09 | -2.199 | -0.462 | -0.29 | 0.921 |
| 10 | -2.199 | -0.462 | 0.396 | 0.572 |
| 11 | 0.343 | 0.681 | -0.683 | -2.199 |
| 12 | -2.199 | -2.199 | -0.993 | 1.226 |
| 13 | -2.199 | -2.199 | 1.299 | -2.199 |
| 14 | -2.199 | -2.199 | 1.299 | -2.199 |
| 15 | -0.462 | -2.199 | 1.037 | -0.826 |
| 16 | 1.013 | -1.403 | -0.993 | -0.462 |
| 17 | 0.632 | -0.184 | 0.162 | -2.199 |
| 18 | 0.139 | -0.993 | 0.271 | 0.156 |
| 19 | -0.618 | -0.618 | -0.462 | 0.829 |
| 20 | 0.057 | 0.301 | 0.392 | -2.199 |
| 21 | -0.993 | 0.088 | -0.087 | 0.483 |
| 22 | 0.38 | -0.051 | -0.906 | 0.168 |