Model info
| Transcription factor | Zeb1 | ||||||||
| Model | ZEB1_MOUSE.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 7 | ||||||||
| Quality | D | ||||||||
| Consensus | nMAGGTG | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 126 | ||||||||
| TF family | HD-ZF factors{3.1.8} | ||||||||
| TF subfamily | ZEB{3.1.8.3} | ||||||||
| MGI | 1344313 | ||||||||
| EntrezGene | 21417 | ||||||||
| UniProt ID | ZEB1_MOUSE | ||||||||
| UniProt AC | Q64318 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 40.467 | 24.733 | 22.424 | 39.608 |
| 02 | 26.099 | 78.177 | 7.289 | 15.668 |
| 03 | 126.463 | 0.77 | 0.0 | 0.0 |
| 04 | 0.0 | 3.847 | 121.162 | 2.223 |
| 05 | 0.77 | 0.0 | 126.463 | 0.0 |
| 06 | 1.539 | 0.0 | 0.0 | 125.694 |
| 07 | 18.042 | 1.454 | 106.967 | 0.77 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.233 | -0.241 | -0.334 | 0.212 |
| 02 | -0.19 | 0.877 | -1.357 | -0.671 |
| 03 | 1.352 | -2.813 | -3.305 | -3.305 |
| 04 | -3.305 | -1.876 | 1.31 | -2.263 |
| 05 | -2.813 | -3.305 | 1.352 | -3.305 |
| 06 | -2.485 | -3.305 | -3.305 | 1.346 |
| 07 | -0.539 | -2.517 | 1.187 | -2.813 |