Model info
| Transcription factor | Tfdp1 | ||||||||
| Model | TFDP1_MOUSE.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 14 | ||||||||
| Quality | D | ||||||||
| Consensus | RWWKRGCGGGAAAY | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 7 | ||||||||
| TF family | E2F-related factors{3.3.2} | ||||||||
| TF subfamily | Dp-1{3.3.2.2} | ||||||||
| MGI | 101934 | ||||||||
| EntrezGene | 21781 | ||||||||
| UniProt ID | TFDP1_MOUSE | ||||||||
| UniProt AC | Q08639 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 4.677 | 0.453 | 1.418 | 0.453 |
| 02 | 3.259 | 0.0 | 0.966 | 2.776 |
| 03 | 3.138 | 0.0 | 1.086 | 2.776 |
| 04 | 1.086 | 0.0 | 2.052 | 3.862 |
| 05 | 2.052 | 1.086 | 3.862 | 0.0 |
| 06 | 0.0 | 0.0 | 7.0 | 0.0 |
| 07 | 0.0 | 7.0 | 0.0 | 0.0 |
| 08 | 0.0 | 0.0 | 7.0 | 0.0 |
| 09 | 0.0 | 1.81 | 5.19 | 0.0 |
| 10 | 0.0 | 0.0 | 6.034 | 0.966 |
| 11 | 5.914 | 1.086 | 0.0 | 0.0 |
| 12 | 4.948 | 0.0 | 2.052 | 0.0 |
| 13 | 4.948 | 0.0 | 2.052 | 0.0 |
| 14 | 1.267 | 3.319 | 0.181 | 2.233 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.837 | -0.868 | -0.161 | -0.868 |
| 02 | 0.516 | -1.525 | -0.432 | 0.378 |
| 03 | 0.483 | -1.525 | -0.352 | 0.378 |
| 04 | -0.352 | -1.525 | 0.127 | 0.665 |
| 05 | 0.127 | -0.352 | 0.665 | -1.525 |
| 06 | -1.525 | -1.525 | 1.208 | -1.525 |
| 07 | -1.525 | 1.208 | -1.525 | -1.525 |
| 08 | -1.525 | -1.525 | 1.208 | -1.525 |
| 09 | -1.525 | 0.027 | 0.931 | -1.525 |
| 10 | -1.525 | -1.525 | 1.07 | -0.432 |
| 11 | 1.051 | -0.352 | -1.525 | -1.525 |
| 12 | 0.888 | -1.525 | 0.127 | -1.525 |
| 13 | 0.888 | -1.525 | 0.127 | -1.525 |
| 14 | -0.243 | 0.532 | -1.209 | 0.195 |