Model info
| Transcription factor | Tfcp2l1 | ||||||||
| Model | TF2L1_MOUSE.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 20 | ||||||||
| Quality | C | ||||||||
| Consensus | dRdCYRGhhdRARCYRGhhb | ||||||||
| wAUC | 0.9527412135801124 | ||||||||
| Best AUC | 0.9527412135801123 | ||||||||
| Benchmark datasets | 1 | ||||||||
| Aligned words | 467 | ||||||||
| TF family | CP2-related factors{6.7.2} | ||||||||
| TF subfamily | CP2-L1 (LBP-9, CRTR-1){6.7.2.0.2} | ||||||||
| MGI | 2444691 | ||||||||
| EntrezGene | 81879 | ||||||||
| UniProt ID | TF2L1_MOUSE | ||||||||
| UniProt AC | Q3UNW5 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 149.525 | 54.526 | 206.399 | 56.576 |
| 02 | 275.111 | 24.671 | 124.394 | 42.849 |
| 03 | 211.429 | 15.402 | 144.824 | 95.371 |
| 04 | 0.947 | 442.099 | 23.03 | 0.95 |
| 05 | 63.295 | 264.996 | 0.0 | 138.735 |
| 06 | 170.108 | 1.05 | 274.318 | 21.55 |
| 07 | 0.0 | 17.517 | 449.509 | 0.0 |
| 08 | 100.699 | 128.896 | 25.993 | 211.438 |
| 09 | 45.868 | 193.904 | 41.603 | 185.651 |
| 10 | 146.676 | 10.928 | 95.074 | 214.348 |
| 11 | 82.057 | 52.359 | 329.766 | 2.844 |
| 12 | 373.339 | 14.035 | 62.083 | 17.569 |
| 13 | 235.536 | 1.05 | 149.793 | 80.647 |
| 14 | 0.0 | 454.766 | 11.123 | 1.137 |
| 15 | 42.867 | 276.009 | 1.023 | 147.126 |
| 16 | 159.97 | 4.903 | 278.765 | 23.387 |
| 17 | 0.0 | 8.663 | 457.362 | 1.0 |
| 18 | 99.723 | 131.799 | 23.297 | 212.207 |
| 19 | 55.302 | 145.636 | 43.681 | 222.407 |
| 20 | 68.907 | 116.941 | 79.666 | 201.513 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.245 | -0.747 | 0.564 | -0.711 |
| 02 | 0.85 | -1.507 | 0.063 | -0.98 |
| 03 | 0.588 | -1.944 | 0.213 | -0.199 |
| 04 | -3.863 | 1.322 | -1.572 | -3.862 |
| 05 | -0.601 | 0.812 | -4.344 | 0.17 |
| 06 | 0.372 | -3.823 | 0.847 | -1.634 |
| 07 | -4.344 | -1.826 | 1.338 | -4.344 |
| 08 | -0.146 | 0.098 | -1.458 | 0.588 |
| 09 | -0.914 | 0.502 | -1.009 | 0.459 |
| 10 | 0.225 | -2.25 | -0.202 | 0.602 |
| 11 | -0.347 | -0.786 | 1.03 | -3.296 |
| 12 | 1.153 | -2.028 | -0.62 | -1.823 |
| 13 | 0.695 | -3.823 | 0.246 | -0.364 |
| 14 | -4.344 | 1.35 | -2.235 | -3.79 |
| 15 | -0.98 | 0.853 | -3.833 | 0.229 |
| 16 | 0.311 | -2.911 | 0.863 | -1.557 |
| 17 | -4.344 | -2.451 | 1.356 | -3.842 |
| 18 | -0.155 | 0.12 | -1.561 | 0.592 |
| 19 | -0.733 | 0.218 | -0.962 | 0.638 |
| 20 | -0.518 | 0.002 | -0.376 | 0.54 |