Model info
| Transcription factor | TBX21 | ||||||||
| Model | TBX21_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 12 | ||||||||
| Quality | D | ||||||||
| Consensus | dARGTGTGAWhh | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 26900 | ||||||||
| TF family | TBrain-related factors{6.5.2} | ||||||||
| TF subfamily | TBX21 (T-bet){6.5.2.0.3} | ||||||||
| HGNC | 11599 | ||||||||
| EntrezGene | 30009 | ||||||||
| UniProt ID | TBX21_HUMAN | ||||||||
| UniProt AC | Q9UL17 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 10687.285 | 2128.626 | 6252.759 | 5307.33 |
| 02 | 20858.279 | 712.706 | 1734.058 | 1070.958 |
| 03 | 1998.117 | 1291.847 | 19647.772 | 1438.264 |
| 04 | 154.992 | 150.733 | 23909.737 | 160.538 |
| 05 | 153.123 | 386.148 | 198.003 | 23638.726 |
| 06 | 161.08 | 149.426 | 23908.729 | 156.766 |
| 07 | 371.43 | 1159.3 | 226.141 | 22619.129 |
| 08 | 230.726 | 492.827 | 21502.99 | 2149.457 |
| 09 | 23403.012 | 286.042 | 403.369 | 283.577 |
| 10 | 15189.263 | 3036.735 | 1385.202 | 4764.801 |
| 11 | 10137.395 | 4245.814 | 3747.868 | 6244.923 |
| 12 | 5934.167 | 3067.907 | 2620.0 | 12753.926 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.562 | -1.051 | 0.026 | -0.138 |
| 02 | 1.23 | -2.143 | -1.256 | -1.737 |
| 03 | -1.114 | -1.55 | 1.17 | -1.443 |
| 04 | -3.656 | -3.683 | 1.367 | -3.621 |
| 05 | -3.668 | -2.753 | -3.415 | 1.355 |
| 06 | -3.618 | -3.692 | 1.367 | -3.645 |
| 07 | -2.791 | -1.658 | -3.283 | 1.311 |
| 08 | -3.263 | -2.51 | 1.261 | -1.041 |
| 09 | 1.345 | -3.051 | -2.709 | -3.059 |
| 10 | 0.913 | -0.696 | -1.48 | -0.246 |
| 11 | 0.509 | -0.361 | -0.486 | 0.024 |
| 12 | -0.027 | -0.686 | -0.844 | 0.738 |