Model info
| Transcription factor | Tbx20 | ||||||||
| Model | TBX20_MOUSE.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 13 | ||||||||
| Quality | C | ||||||||
| Consensus | vdSTGnTGACARv | ||||||||
| wAUC | 0.8085061772309449 | ||||||||
| Best AUC | 0.808506177230945 | ||||||||
| Benchmark datasets | 1 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | TBX1-related factors{6.5.3} | ||||||||
| TF subfamily | TBX20{6.5.3.0.5} | ||||||||
| MGI | 1888496 | ||||||||
| EntrezGene | 57246 | ||||||||
| UniProt ID | TBX20_MOUSE | ||||||||
| UniProt AC | Q9ES03 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 159.85 | 83.914 | 182.553 | 73.682 |
| 02 | 134.29 | 56.004 | 230.525 | 79.181 |
| 03 | 20.519 | 139.456 | 305.984 | 34.041 |
| 04 | 28.897 | 43.518 | 10.269 | 417.315 |
| 05 | 9.386 | 1.01 | 476.593 | 13.011 |
| 06 | 97.846 | 174.749 | 102.578 | 124.827 |
| 07 | 31.156 | 6.344 | 43.387 | 419.113 |
| 08 | 3.523 | 4.03 | 488.502 | 3.946 |
| 09 | 435.623 | 28.795 | 28.102 | 7.479 |
| 10 | 47.613 | 406.539 | 35.531 | 10.317 |
| 11 | 460.23 | 1.847 | 17.933 | 19.99 |
| 12 | 53.2 | 16.578 | 385.79 | 44.433 |
| 13 | 57.414 | 162.415 | 239.171 | 40.999 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.243 | -0.393 | 0.375 | -0.52 |
| 02 | 0.071 | -0.788 | 0.606 | -0.449 |
| 03 | -1.746 | 0.108 | 0.888 | -1.268 |
| 04 | -1.425 | -1.032 | -2.371 | 1.197 |
| 05 | -2.448 | -3.899 | 1.329 | -2.162 |
| 06 | -0.242 | 0.332 | -0.195 | -0.001 |
| 07 | -1.353 | -2.774 | -1.035 | 1.201 |
| 08 | -3.216 | -3.121 | 1.354 | -3.136 |
| 09 | 1.24 | -1.428 | -1.451 | -2.64 |
| 10 | -0.945 | 1.171 | -1.227 | -2.367 |
| 11 | 1.294 | -3.617 | -1.871 | -1.771 |
| 12 | -0.838 | -1.943 | 1.119 | -1.012 |
| 13 | -0.764 | 0.259 | 0.643 | -1.09 |