Model info
| Transcription factor | Stat1 | ||||||||
| Model | STAT1_MOUSE.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 19 | ||||||||
| Quality | A | ||||||||
| Consensus | bhYYYdSTTYChnWTTYhb | ||||||||
| wAUC | 0.790531917702979 | ||||||||
| Best AUC | 0.8509351045395153 | ||||||||
| Benchmark datasets | 6 | ||||||||
| Aligned words | 516 | ||||||||
| TF family | STAT factors{6.2.1} | ||||||||
| TF subfamily | STAT1{6.2.1.0.1} | ||||||||
| MGI | 103063 | ||||||||
| EntrezGene | |||||||||
| UniProt ID | STAT1_MOUSE | ||||||||
| UniProt AC | P42225 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 63.194 | 184.154 | 121.441 | 130.01 |
| 02 | 63.878 | 103.585 | 58.178 | 273.157 |
| 03 | 26.614 | 113.963 | 41.251 | 316.971 |
| 04 | 39.733 | 81.481 | 49.763 | 327.821 |
| 05 | 50.881 | 284.554 | 37.896 | 125.468 |
| 06 | 272.531 | 27.012 | 81.302 | 117.953 |
| 07 | 4.957 | 223.776 | 224.169 | 45.896 |
| 08 | 18.436 | 7.871 | 1.584 | 470.908 |
| 09 | 3.413 | 7.037 | 14.187 | 474.162 |
| 10 | 4.344 | 177.135 | 12.457 | 304.863 |
| 11 | 10.375 | 380.623 | 9.847 | 97.954 |
| 12 | 101.542 | 143.384 | 46.166 | 207.707 |
| 13 | 83.987 | 182.63 | 87.868 | 144.313 |
| 14 | 42.982 | 40.574 | 23.662 | 391.58 |
| 15 | 14.599 | 41.725 | 8.059 | 434.415 |
| 16 | 2.795 | 119.012 | 6.595 | 370.396 |
| 17 | 31.519 | 301.403 | 15.758 | 150.119 |
| 18 | 54.145 | 180.521 | 23.983 | 240.15 |
| 19 | 42.761 | 152.038 | 85.995 | 218.005 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.668 | 0.386 | -0.026 | 0.041 |
| 02 | -0.657 | -0.183 | -0.748 | 0.777 |
| 03 | -1.5 | -0.089 | -1.082 | 0.925 |
| 04 | -1.118 | -0.419 | -0.9 | 0.959 |
| 05 | -0.879 | 0.818 | -1.163 | 0.006 |
| 06 | 0.775 | -1.486 | -0.421 | -0.055 |
| 07 | -2.965 | 0.579 | 0.581 | -0.979 |
| 08 | -1.843 | -2.595 | -3.695 | 1.32 |
| 09 | -3.236 | -2.688 | -2.082 | 1.327 |
| 10 | -3.064 | 0.347 | -2.199 | 0.887 |
| 11 | -2.359 | 1.108 | -2.405 | -0.238 |
| 12 | -0.203 | 0.138 | -0.973 | 0.505 |
| 13 | -0.389 | 0.378 | -0.345 | 0.144 |
| 14 | -1.042 | -1.098 | -1.611 | 1.136 |
| 15 | -2.056 | -1.071 | -2.575 | 1.239 |
| 16 | -3.369 | -0.046 | -2.74 | 1.08 |
| 17 | -1.34 | 0.875 | -1.987 | 0.183 |
| 18 | -0.818 | 0.366 | -1.598 | 0.649 |
| 19 | -1.047 | 0.196 | -0.366 | 0.553 |