Model info
| Transcription factor | Rest | ||||||||
| Model | REST_MOUSE.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 21 | ||||||||
| Quality | A | ||||||||
| Consensus | bMRSSWMYdhGGMCAGMdMMh | ||||||||
| wAUC | 0.8789557760012597 | ||||||||
| Best AUC | 0.9118631451175175 | ||||||||
| Benchmark datasets | 2 | ||||||||
| Aligned words | 431 | ||||||||
| TF family | Factors with multiple dispersed zinc fingers{2.3.4} | ||||||||
| TF subfamily | unclassified{2.3.4.0} | ||||||||
| MGI | 104897 | ||||||||
| EntrezGene | 19712 | ||||||||
| UniProt ID | REST_MOUSE | ||||||||
| UniProt AC | Q8VIG1 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 26.404 | 131.573 | 55.41 | 217.688 |
| 02 | 47.762 | 314.341 | 41.693 | 27.28 |
| 03 | 266.727 | 37.763 | 73.354 | 53.23 |
| 04 | 39.199 | 66.202 | 305.404 | 20.271 |
| 05 | 53.967 | 243.825 | 112.828 | 20.456 |
| 06 | 334.54 | 23.709 | 23.729 | 49.098 |
| 07 | 57.366 | 321.917 | 32.619 | 19.174 |
| 08 | 22.557 | 299.419 | 42.602 | 66.498 |
| 09 | 237.81 | 55.048 | 70.845 | 67.373 |
| 10 | 46.861 | 116.009 | 34.575 | 233.63 |
| 11 | 21.782 | 9.691 | 395.553 | 4.05 |
| 12 | 16.472 | 10.984 | 403.619 | 0.0 |
| 13 | 323.65 | 72.961 | 19.539 | 14.926 |
| 14 | 20.897 | 333.724 | 71.634 | 4.82 |
| 15 | 406.809 | 8.433 | 12.96 | 2.874 |
| 16 | 11.461 | 6.954 | 410.013 | 2.647 |
| 17 | 80.489 | 289.96 | 19.121 | 41.506 |
| 18 | 140.435 | 1.862 | 141.918 | 146.86 |
| 19 | 107.226 | 249.968 | 55.651 | 18.23 |
| 20 | 75.0 | 312.298 | 11.695 | 32.082 |
| 21 | 82.642 | 216.549 | 38.088 | 93.796 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -1.365 | 0.197 | -0.652 | 0.696 |
| 02 | -0.796 | 1.061 | -0.928 | -1.334 |
| 03 | 0.898 | -1.023 | -0.378 | -0.691 |
| 04 | -0.987 | -0.479 | 1.033 | -1.613 |
| 05 | -0.678 | 0.809 | 0.045 | -1.604 |
| 06 | 1.123 | -1.466 | -1.465 | -0.77 |
| 07 | -0.618 | 1.085 | -1.164 | -1.664 |
| 08 | -1.513 | 1.013 | -0.907 | -0.474 |
| 09 | 0.784 | -0.659 | -0.412 | -0.461 |
| 10 | -0.815 | 0.073 | -1.108 | 0.766 |
| 11 | -1.546 | -2.277 | 1.29 | -2.977 |
| 12 | -1.804 | -2.168 | 1.31 | -4.278 |
| 13 | 1.09 | -0.383 | -1.647 | -1.894 |
| 14 | -1.584 | 1.121 | -0.401 | -2.848 |
| 15 | 1.318 | -2.396 | -2.021 | -3.215 |
| 16 | -2.131 | -2.557 | 1.326 | -3.268 |
| 17 | -0.287 | 0.981 | -1.667 | -0.932 |
| 18 | 0.262 | -3.477 | 0.272 | 0.306 |
| 19 | -0.005 | 0.833 | -0.648 | -1.711 |
| 20 | -0.356 | 1.055 | -2.113 | -1.179 |
| 21 | -0.261 | 0.691 | -1.015 | -0.137 |