Model info
| Transcription factor | REST | ||||||||
| Model | REST_HUMAN.H10DI.A | ||||||||
| Model type | Dinucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 23 | ||||||||
| Quality | A | ||||||||
| Consensus | dYCAGSACCdhGGACAGYKSChn | ||||||||
| wAUC | 0.9746021081400107 | ||||||||
| Best AUC | 0.9858075661721089 | ||||||||
| Benchmark datasets | 31 | ||||||||
| Aligned words | 403 | ||||||||
| TF family | Factors with multiple dispersed zinc fingers{2.3.4} | ||||||||
| TF subfamily | unclassified{2.3.4.0} | ||||||||
| HGNC | 9966 | ||||||||
| EntrezGene | 5978 | ||||||||
| UniProt ID | REST_HUMAN | ||||||||
| UniProt AC | Q13127 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 01 | 0.828 | 8.189 | 9.764 | 32.992 | 0.762 | 13.393 | 1.59 | 31.736 | 2.466 | 15.626 | 17.701 | 58.068 | 0.769 | 17.23 | 5.913 | 186.622 |
| 02 | 0.0 | 3.273 | 0.762 | 0.79 | 0.0 | 46.083 | 2.058 | 6.297 | 1.633 | 29.205 | 0.838 | 3.291 | 2.746 | 296.062 | 3.801 | 6.81 |
| 03 | 3.507 | 0.871 | 0.0 | 0.0 | 369.383 | 0.786 | 2.698 | 1.758 | 3.644 | 1.236 | 1.817 | 0.762 | 11.752 | 2.566 | 2.869 | 0.0 |
| 04 | 5.954 | 0.75 | 380.622 | 0.96 | 2.566 | 0.871 | 0.0 | 2.023 | 0.902 | 1.153 | 5.328 | 0.0 | 0.0 | 0.962 | 1.557 | 0.0 |
| 05 | 1.721 | 3.936 | 3.765 | 0.0 | 0.0 | 2.865 | 0.0 | 0.871 | 25.63 | 275.479 | 60.814 | 25.585 | 0.0 | 0.96 | 2.023 | 0.0 |
| 06 | 26.238 | 0.0 | 1.113 | 0.0 | 281.142 | 0.0 | 0.0 | 2.098 | 64.762 | 0.0 | 1.84 | 0.0 | 26.457 | 0.0 | 0.0 | 0.0 |
| 07 | 1.57 | 397.028 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.786 | 1.113 | 1.054 | 0.0 | 2.098 | 0.0 | 0.0 |
| 08 | 0.0 | 1.57 | 0.0 | 0.0 | 4.325 | 378.48 | 3.261 | 13.846 | 0.0 | 1.113 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 1.054 |
| 09 | 2.205 | 0.0 | 1.383 | 0.737 | 220.81 | 26.029 | 60.81 | 73.515 | 0.901 | 1.398 | 0.962 | 0.0 | 0.87 | 8.794 | 3.535 | 1.701 |
| 10 | 38.881 | 76.409 | 19.577 | 89.918 | 1.996 | 0.815 | 2.518 | 30.893 | 6.36 | 35.256 | 4.876 | 20.197 | 6.551 | 15.609 | 6.107 | 47.685 |
| 11 | 0.0 | 0.0 | 53.789 | 0.0 | 4.438 | 0.0 | 123.651 | 0.0 | 1.975 | 0.0 | 31.103 | 0.0 | 1.057 | 0.0 | 187.637 | 0.0 |
| 12 | 0.0 | 0.0 | 7.47 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 2.218 | 0.0 | 393.962 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| 13 | 2.218 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 371.96 | 16.192 | 2.049 | 11.231 | 0.0 | 0.0 | 0.0 | 0.0 |
| 14 | 1.024 | 319.666 | 44.329 | 9.159 | 0.0 | 16.192 | 0.0 | 0.0 | 0.0 | 2.049 | 0.0 | 0.0 | 0.0 | 11.231 | 0.0 | 0.0 |
| 15 | 0.0 | 1.024 | 0.0 | 0.0 | 349.138 | 0.0 | 0.0 | 0.0 | 43.464 | 0.865 | 0.0 | 0.0 | 9.159 | 0.0 | 0.0 | 0.0 |
| 16 | 3.867 | 3.181 | 393.509 | 1.203 | 0.0 | 0.0 | 0.0 | 1.89 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.0 |
| 17 | 0.0 | 1.039 | 2.0 | 0.828 | 0.0 | 1.801 | 1.379 | 0.0 | 33.925 | 296.526 | 23.769 | 39.29 | 1.203 | 0.0 | 1.89 | 0.0 |
| 18 | 4.239 | 0.0 | 25.152 | 5.737 | 70.321 | 4.161 | 132.487 | 92.397 | 0.962 | 0.0 | 22.396 | 5.68 | 4.102 | 0.0 | 19.878 | 16.139 |
| 19 | 7.855 | 33.728 | 29.969 | 8.072 | 2.015 | 1.193 | 0.0 | 0.953 | 21.864 | 121.304 | 38.778 | 17.966 | 2.729 | 110.502 | 3.91 | 2.812 |
| 20 | 1.399 | 27.704 | 1.954 | 3.406 | 21.998 | 208.119 | 2.935 | 33.677 | 2.856 | 57.396 | 1.15 | 11.255 | 0.743 | 26.192 | 0.0 | 2.867 |
| 21 | 2.587 | 19.871 | 2.902 | 1.635 | 92.672 | 134.546 | 30.01 | 62.181 | 0.0 | 2.399 | 3.64 | 0.0 | 5.555 | 26.173 | 11.534 | 7.943 |
| 22 | 21.911 | 26.693 | 36.865 | 15.345 | 71.888 | 49.222 | 35.772 | 26.108 | 5.726 | 16.411 | 17.38 | 8.57 | 3.965 | 19.705 | 39.033 | 9.056 |
PWM
| AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 01 | -3.058 | -1.095 | -0.926 | 0.265 | -3.115 | -0.62 | -2.567 | 0.226 | -2.199 | -0.47 | -0.348 | 0.825 | -3.108 | -0.375 | -1.404 | 1.988 |
| 02 | -4.223 | -1.948 | -3.115 | -3.09 | -4.223 | 0.596 | -2.353 | -1.345 | -2.546 | 0.144 | -3.049 | -1.944 | -2.105 | 2.449 | -1.813 | -1.271 |
| 03 | -1.886 | -3.022 | -4.223 | -4.223 | 2.67 | -3.093 | -2.12 | -2.485 | -1.852 | -2.766 | -2.458 | -3.115 | -0.747 | -2.164 | -2.066 | -4.223 |
| 04 | -1.398 | -3.125 | 2.7 | -2.954 | -2.164 | -3.022 | -4.223 | -2.368 | -2.998 | -2.819 | -1.502 | -4.223 | -4.223 | -2.952 | -2.584 | -4.223 |
| 05 | -2.502 | -1.782 | -1.822 | -4.223 | -4.223 | -2.067 | -4.223 | -3.022 | 0.016 | 2.377 | 0.871 | 0.014 | -4.223 | -2.954 | -2.368 | -4.223 |
| 06 | 0.039 | -4.223 | -2.845 | -4.223 | 2.397 | -4.223 | -4.223 | -2.337 | 0.934 | -4.223 | -2.447 | -4.223 | 0.047 | -4.223 | -4.223 | -4.223 |
| 07 | -2.577 | 2.742 | -4.223 | -4.223 | -4.223 | -4.223 | -4.223 | -4.223 | -4.223 | -3.093 | -2.845 | -2.886 | -4.223 | -2.337 | -4.223 | -4.223 |
| 08 | -4.223 | -2.577 | -4.223 | -4.223 | -1.695 | 2.694 | -1.952 | -0.588 | -4.223 | -2.845 | -4.223 | -4.223 | -4.223 | -4.223 | -4.223 | -2.886 |
| 09 | -2.295 | -4.223 | -2.679 | -3.137 | 2.156 | 0.031 | 0.871 | 1.06 | -2.999 | -2.67 | -2.952 | -4.223 | -3.023 | -1.027 | -1.879 | -2.512 |
| 10 | 0.427 | 1.098 | -0.249 | 1.26 | -2.379 | -3.069 | -2.18 | 0.2 | -1.335 | 0.331 | -1.584 | -0.219 | -1.307 | -0.471 | -1.374 | 0.63 |
| 11 | -4.223 | -4.223 | 0.749 | -4.223 | -1.671 | -4.223 | 1.578 | -4.223 | -2.388 | -4.223 | 0.207 | -4.223 | -2.884 | -4.223 | 1.994 | -4.223 |
| 12 | -4.223 | -4.223 | -1.183 | -4.223 | -4.223 | -4.223 | -4.223 | -4.223 | -2.29 | -4.223 | 2.734 | -4.223 | -4.223 | -4.223 | -4.223 | -4.223 |
| 13 | -2.29 | -4.223 | -4.223 | -4.223 | -4.223 | -4.223 | -4.223 | -4.223 | 2.677 | -0.435 | -2.357 | -0.791 | -4.223 | -4.223 | -4.223 | -4.223 |
| 14 | -2.907 | 2.526 | 0.557 | -0.988 | -4.223 | -0.435 | -4.223 | -4.223 | -4.223 | -2.357 | -4.223 | -4.223 | -4.223 | -0.791 | -4.223 | -4.223 |
| 15 | -4.223 | -2.907 | -4.223 | -4.223 | 2.614 | -4.223 | -4.223 | -4.223 | 0.538 | -3.027 | -4.223 | -4.223 | -0.988 | -4.223 | -4.223 | -4.223 |
| 16 | -1.798 | -1.974 | 2.733 | -2.787 | -4.223 | -4.223 | -4.223 | -2.425 | -4.223 | -4.223 | -4.223 | -4.223 | -4.223 | -4.223 | -4.223 | -4.223 |
| 17 | -4.223 | -2.896 | -2.378 | -3.058 | -4.223 | -2.465 | -2.681 | -4.223 | 0.292 | 2.451 | -0.059 | 0.438 | -2.787 | -4.223 | -2.425 | -4.223 |
| 18 | -1.714 | -4.223 | -0.003 | -1.432 | 1.016 | -1.731 | 1.647 | 1.287 | -2.952 | -4.223 | -0.117 | -1.442 | -1.744 | -4.223 | -0.234 | -0.439 |
| 19 | -1.135 | 0.287 | 0.17 | -1.109 | -2.372 | -2.793 | -4.223 | -2.959 | -0.141 | 1.559 | 0.425 | -0.334 | -2.11 | 1.466 | -1.788 | -2.084 |
| 20 | -2.669 | 0.092 | -2.397 | -1.913 | -0.135 | 2.097 | -2.046 | 0.285 | -2.07 | 0.814 | -2.821 | -0.789 | -3.131 | 0.037 | -4.223 | -2.066 |
| 21 | -2.157 | -0.235 | -2.056 | -2.544 | 1.29 | 1.662 | 0.171 | 0.893 | -4.223 | -2.222 | -1.853 | -4.223 | -1.463 | 0.036 | -0.765 | -1.124 |
| 22 | -0.139 | 0.056 | 0.375 | -0.488 | 1.038 | 0.661 | 0.345 | 0.034 | -1.434 | -0.422 | -0.366 | -1.052 | -1.775 | -0.243 | 0.431 | -0.999 |