Model info
Transcription factorNR1I2
ModelNR1I2_HUMAN.H10MO.S
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length8
Quality
S
ConsensusdAGKTCAb
wAUC
Best AUC
Benchmark datasets
Aligned words45
TF familyThyroid hormone receptor-related factors (NR1){2.1.2}
TF subfamilyVitamin D receptor (NR1I){2.1.2.4}
HGNC7968
EntrezGene8856
UniProt IDNR1I2_HUMAN
UniProt ACO75469
CommentSecondary motif.
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.0148
0.0005 5.8648
0.0001 7.0781
PCM
ACGT
0121.3982.96614.9365.932
0234.2160.011.0170.0
030.00.045.2330.0
044.7670.08.79231.674
050.00.9530.044.28
060.042.1613.0720.0
0744.280.00.9530.0
084.55515.25411.22914.195
PWM
ACGT
010.6-1.1410.259-0.577
021.054-2.555-0.024-2.555
03-2.555-2.5551.326-2.555
04-0.762-2.555-0.230.979
05-2.555-1.861-2.5551.305
06-2.5551.257-1.114-2.555
071.305-2.555-1.861-2.555
08-0.80.279-0.0070.211