Model info
Transcription factorMSC
ModelMUSC_HUMAN.H10MO.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHT-SELEX
Model length18
Quality
D
ConsensusCAGAAGACGGCATACGAb
wAUC
Best AUC
Benchmark datasets
Aligned words16
TF familyTal-related factors{1.2.3}
TF subfamilyMesp-like factors{1.2.3.3}
HGNC7321
EntrezGene9242
UniProt IDMUSC_HUMAN
UniProt ACO60682
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 -0.2476
0.0005 0.7662
0.0001 2.9334
PCM
ACGT
010.016.00.00.0
0216.00.00.00.0
030.00.016.00.0
0416.00.00.00.0
0516.00.00.00.0
060.00.016.00.0
0716.00.00.00.0
080.016.00.00.0
090.00.016.00.0
100.00.016.00.0
110.016.00.00.0
1216.00.00.00.0
130.00.00.016.0
1416.00.00.00.0
150.016.00.00.0
160.00.016.00.0
1716.00.00.00.0
180.04.06.06.0
PWM
ACGT
01-1.9131.269-1.913-1.913
021.269-1.913-1.913-1.913
03-1.913-1.9131.269-1.913
041.269-1.913-1.913-1.913
051.269-1.913-1.913-1.913
06-1.913-1.9131.269-1.913
071.269-1.913-1.913-1.913
08-1.9131.269-1.913-1.913
09-1.913-1.9131.269-1.913
10-1.913-1.9131.269-1.913
11-1.9131.269-1.913-1.913
121.269-1.913-1.913-1.913
13-1.913-1.913-1.9131.269
141.269-1.913-1.913-1.913
15-1.9131.269-1.913-1.913
16-1.913-1.9131.269-1.913
171.269-1.913-1.913-1.913
18-1.9130.00.3550.355