Model info
Transcription factorMef2d
ModelMEF2D_MOUSE.H10MO.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length12
Quality
C
ConsensusKCTATTTTTAKv
wAUC
Best AUC
Benchmark datasets
Aligned words11
TF familyRegulators of differentiation{5.1.1}
TF subfamilyMEF-2{5.1.1.1}
MGI99533
EntrezGene17261
UniProt IDMEF2D_MOUSE
UniProt ACQ63943
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.7791
0.0005 5.5263
0.0001 7.1092
PCM
ACGT
011.5050.5796.4842.432
020.09.1471.0420.811
030.00.00.011.0
049.9580.01.0420.0
050.01.0420.09.958
062.0840.00.08.916
071.0420.00.09.958
084.1680.00.06.832
091.0420.00.09.958
109.9580.01.0420.0
110.9260.07.0633.011
123.4744.2842.6630.579
PWM
ACGT
01-0.465-1.0450.749-0.1
02-1.7211.068-0.713-0.865
03-1.721-1.721-1.7211.242
041.148-1.721-0.713-1.721
05-1.721-0.713-1.7211.148
06-0.222-1.721-1.7211.044
07-0.713-1.721-1.7211.148
080.353-1.721-1.7210.797
09-0.713-1.721-1.7211.148
101.148-1.721-0.713-1.721
11-0.786-1.7210.8280.075
120.1960.377-0.026-1.045