Model info
| Transcription factor | Lef1 | ||||||||
| Model | LEF1_MOUSE.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 7 | ||||||||
| Quality | C | ||||||||
| Consensus | CTTTGWW | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 67 | ||||||||
| TF family | TCF-7-related factors{4.1.3} | ||||||||
| TF subfamily | LEF-1 (TCF-1alpha) [1]{4.1.3.0.4} | ||||||||
| MGI | 96770 | ||||||||
| EntrezGene | 16842 | ||||||||
| UniProt ID | LEF1_MOUSE | ||||||||
| UniProt AC | P27782 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.251 | 63.872 | 2.37 | 0.251 |
| 02 | 1.004 | 1.115 | 0.0 | 64.625 |
| 03 | 0.0 | 0.0 | 0.0 | 66.744 |
| 04 | 0.0 | 0.0 | 0.0 | 66.744 |
| 05 | 0.0 | 0.0 | 66.744 | 0.0 |
| 06 | 34.515 | 3.792 | 0.0 | 28.437 |
| 07 | 24.144 | 2.286 | 2.286 | 38.028 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -2.612 | 1.298 | -1.646 | -2.612 |
| 02 | -2.156 | -2.103 | -2.827 | 1.309 |
| 03 | -2.827 | -2.827 | -2.827 | 1.341 |
| 04 | -2.827 | -2.827 | -2.827 | 1.341 |
| 05 | -2.827 | -2.827 | 1.341 | -2.827 |
| 06 | 0.696 | -1.298 | -2.827 | 0.508 |
| 07 | 0.351 | -1.671 | -1.671 | 0.79 |