Model info
| Transcription factor | KLF16 | ||||||||
| Model | KLF16_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 19 | ||||||||
| Quality | D | ||||||||
| Consensus | dbGGGYGKGdndGKKKSKb | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 650 | ||||||||
| TF family | Three-zinc finger Krüppel-related factors{2.3.1} | ||||||||
| TF subfamily | Krüppel-like factors{2.3.1.2} | ||||||||
| HGNC | 16857 | ||||||||
| EntrezGene | 83855 | ||||||||
| UniProt ID | KLF16_HUMAN | ||||||||
| UniProt AC | Q9BXK1 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 125.5 | 105.5 | 292.5 | 126.5 |
| 02 | 63.5 | 78.5 | 344.5 | 163.5 |
| 03 | 39.75 | 21.75 | 558.75 | 29.75 |
| 04 | 5.25 | 14.25 | 617.25 | 13.25 |
| 05 | 22.25 | 5.25 | 598.25 | 24.25 |
| 06 | 83.0 | 315.0 | 8.0 | 244.0 |
| 07 | 29.75 | 8.75 | 579.75 | 31.75 |
| 08 | 25.5 | 19.5 | 367.5 | 237.5 |
| 09 | 43.25 | 3.25 | 567.25 | 36.25 |
| 10 | 101.0 | 32.0 | 341.0 | 176.0 |
| 11 | 91.0 | 174.0 | 233.0 | 152.0 |
| 12 | 123.0 | 57.0 | 385.0 | 85.0 |
| 13 | 48.0 | 21.0 | 526.0 | 55.0 |
| 14 | 40.0 | 42.0 | 512.0 | 56.0 |
| 15 | 50.0 | 45.0 | 440.0 | 115.0 |
| 16 | 46.75 | 70.75 | 453.75 | 78.75 |
| 17 | 38.0 | 82.0 | 462.0 | 68.0 |
| 18 | 27.0 | 68.0 | 464.0 | 91.0 |
| 19 | 67.0 | 95.0 | 340.0 | 148.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.255 | -0.427 | 0.583 | -0.248 |
| 02 | -0.924 | -0.717 | 0.746 | 0.006 |
| 03 | -1.378 | -1.949 | 1.228 | -1.655 |
| 04 | -3.174 | -2.336 | 1.327 | -2.401 |
| 05 | -1.928 | -3.174 | 1.296 | -1.848 |
| 06 | -0.662 | 0.657 | -2.837 | 0.403 |
| 07 | -1.655 | -2.762 | 1.265 | -1.593 |
| 08 | -1.8 | -2.05 | 0.811 | 0.376 |
| 09 | -1.297 | -3.518 | 1.243 | -1.466 |
| 10 | -0.47 | -1.585 | 0.736 | 0.079 |
| 11 | -0.572 | 0.068 | 0.357 | -0.066 |
| 12 | -0.275 | -1.03 | 0.857 | -0.639 |
| 13 | -1.196 | -1.982 | 1.168 | -1.064 |
| 14 | -1.372 | -1.325 | 1.141 | -1.047 |
| 15 | -1.157 | -1.259 | 0.99 | -0.342 |
| 16 | -1.222 | -0.819 | 1.021 | -0.714 |
| 17 | -1.421 | -0.674 | 1.038 | -0.858 |
| 18 | -1.747 | -0.858 | 1.043 | -0.572 |
| 19 | -0.872 | -0.53 | 0.733 | -0.092 |