Model info
Transcription factorIRF2
ModelIRF2_HUMAN.H10MO.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length14
Quality
C
ConsensusbRAAARYGAAASbv
wAUC
Best AUC
Benchmark datasets
Aligned words84
TF familyInterferon-regulatory factors{3.5.3}
TF subfamilyIRF-2{3.5.3.0.2}
HGNC6117
EntrezGene3660
UniProt IDIRF2_HUMAN
UniProt ACP14316
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.6131
0.0005 4.6781
0.0001 6.8981
PCM
ACGT
0111.42422.57634.30114.699
0219.8993.21558.621.267
0373.0621.8517.3070.779
0478.5560.00.8773.567
0582.5620.00.00.438
0617.0249.64652.923.41
073.75130.6123.21545.422
083.7020.079.2980.0
0981.6850.01.3150.0
1081.5390.9740.00.487
1180.9541.0720.00.974
124.38428.07945.0815.456
135.74933.10813.12731.017
1429.38314.5426.58412.494
PWM
ACGT
01-0.5560.080.482-0.324
02-0.04-1.6211.005-2.221
031.222-2.001-0.955-2.451
041.293-2.985-2.401-1.543
051.342-2.985-2.985-2.651
06-0.187-0.7090.905-1.577
07-1.5040.372-1.6210.756
08-1.514-2.9851.303-2.985
091.332-2.985-2.201-2.985
101.33-2.353-2.985-2.62
111.323-2.307-2.985-2.353
12-1.3820.2890.748-1.203
13-1.160.448-0.4290.385
140.333-0.3340.237-0.474