Model info
| Transcription factor | Hes1 | ||||||||
| Model | HES1_MOUSE.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 13 | ||||||||
| Quality | D | ||||||||
| Consensus | vMSvCAMKvGMhv | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 28 | ||||||||
| TF family | Hairy-related factors{1.2.4} | ||||||||
| TF subfamily | Hairy-like factors{1.2.4.1} | ||||||||
| MGI | 104853 | ||||||||
| EntrezGene | 15205 | ||||||||
| UniProt ID | HES1_MOUSE | ||||||||
| UniProt AC | P35428 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 8.808 | 9.975 | 6.125 | 3.092 |
| 02 | 11.783 | 13.3 | 0.933 | 1.983 |
| 03 | 1.517 | 5.367 | 19.6 | 1.517 |
| 04 | 7.467 | 11.9 | 6.65 | 1.983 |
| 05 | 0.0 | 28.0 | 0.0 | 0.0 |
| 06 | 27.417 | 0.0 | 0.0 | 0.583 |
| 07 | 4.083 | 20.417 | 3.5 | 0.0 |
| 08 | 0.0 | 2.917 | 20.183 | 4.9 |
| 09 | 13.417 | 8.75 | 3.267 | 2.567 |
| 10 | 2.217 | 0.0 | 24.733 | 1.05 |
| 11 | 9.567 | 13.65 | 4.783 | 0.0 |
| 12 | 5.133 | 15.983 | 2.917 | 3.967 |
| 13 | 10.383 | 11.667 | 4.433 | 1.517 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.208 | 0.322 | -0.118 | -0.691 |
| 02 | 0.477 | 0.59 | -1.489 | -1.023 |
| 03 | -1.204 | -0.234 | 0.959 | -1.204 |
| 04 | 0.058 | 0.486 | -0.046 | -1.023 |
| 05 | -2.241 | 1.303 | -2.241 | -2.241 |
| 06 | 1.283 | -2.241 | -2.241 | -1.71 |
| 07 | -0.466 | 0.998 | -0.592 | -2.241 |
| 08 | -2.241 | -0.737 | 0.987 | -0.312 |
| 09 | 0.598 | 0.202 | -0.647 | -0.835 |
| 10 | -0.943 | -2.241 | 1.183 | -1.425 |
| 11 | 0.283 | 0.615 | -0.333 | -2.241 |
| 12 | -0.272 | 0.764 | -0.737 | -0.49 |
| 13 | 0.359 | 0.467 | -0.397 | -1.204 |