Model info
Transcription factorGabpb1
ModelGABP1_MOUSE.H10MO.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length10
Quality
C
ConsensusSCGGAAGbdv
wAUC
Best AUC
Benchmark datasets
Aligned words36
TF family
TF subfamily
MGI95611
EntrezGene14391
UniProt IDGABP1_MOUSE
UniProt ACQ00420
CommentModel is applicable to several TFs or complex subunits: GABP1_MOUSE, GABP2_MOUSE.
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.9141
0.0005 5.7211
0.0001 7.3472
PCM
ACGT
016.39920.877.7141.017
029.0926.910.00.0
030.9570.035.0430.0
040.00.036.00.0
0535.0430.00.9570.0
0633.9670.00.02.033
077.6540.028.3460.0
083.5883.8278.49220.093
095.5024.78419.7345.98
1012.6188.9112.4981.973
PWM
ACGT
01-0.3050.788-0.139-1.644
020.0091.033-2.402-2.402
03-1.675-2.4021.29-2.402
04-2.402-2.4021.316-2.402
051.29-2.402-1.675-2.402
061.259-2.402-2.402-1.217
07-0.146-2.4021.083-2.402
08-0.792-0.74-0.0530.752
09-0.436-0.5550.735-0.364
100.312-0.0090.303-1.238