Model info
| Transcription factor | FOXL1 | ||||||||
| Model | FOXL1_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 19 | ||||||||
| Quality | D | ||||||||
| Consensus | bbWTTGTTTGTTTAYWTTW | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 1207 | ||||||||
| TF family | Forkhead box (FOX) factors{3.3.1} | ||||||||
| TF subfamily | FOXL{3.3.1.12} | ||||||||
| HGNC | 3817 | ||||||||
| EntrezGene | 2300 | ||||||||
| UniProt ID | FOXL1_HUMAN | ||||||||
| UniProt AC | Q12952 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 193.75 | 197.75 | 268.75 | 546.75 |
| 02 | 169.25 | 228.25 | 536.25 | 273.25 |
| 03 | 230.75 | 48.75 | 159.75 | 767.75 |
| 04 | 76.0 | 29.0 | 50.0 | 1052.0 |
| 05 | 0.75 | 0.75 | 0.75 | 1204.75 |
| 06 | 105.5 | 0.5 | 1092.5 | 8.5 |
| 07 | 10.0 | 0.0 | 0.0 | 1197.0 |
| 08 | 0.0 | 0.0 | 0.0 | 1207.0 |
| 09 | 0.0 | 0.0 | 0.0 | 1207.0 |
| 10 | 568.0 | 0.0 | 639.0 | 0.0 |
| 11 | 0.0 | 0.0 | 0.0 | 1207.0 |
| 12 | 0.0 | 0.0 | 0.0 | 1207.0 |
| 13 | 0.0 | 0.0 | 0.0 | 1207.0 |
| 14 | 1190.0 | 0.0 | 14.0 | 3.0 |
| 15 | 1.0 | 618.0 | 1.0 | 587.0 |
| 16 | 500.75 | 22.75 | 25.75 | 657.75 |
| 17 | 125.5 | 17.5 | 22.5 | 1041.5 |
| 18 | 273.0 | 21.0 | 18.0 | 895.0 |
| 19 | 233.25 | 151.25 | 101.25 | 721.25 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.44 | -0.42 | -0.115 | 0.592 |
| 02 | -0.574 | -0.277 | 0.572 | -0.099 |
| 03 | -0.266 | -1.793 | -0.631 | 0.93 |
| 04 | -1.362 | -2.289 | -1.769 | 1.245 |
| 05 | -4.79 | -4.79 | -4.79 | 1.38 |
| 06 | -1.04 | -4.894 | 1.282 | -3.386 |
| 07 | -3.25 | -5.142 | -5.142 | 1.374 |
| 08 | -5.142 | -5.142 | -5.142 | 1.382 |
| 09 | -5.142 | -5.142 | -5.142 | 1.382 |
| 10 | 0.63 | -5.142 | 0.747 | -5.142 |
| 11 | -5.142 | -5.142 | -5.142 | 1.382 |
| 12 | -5.142 | -5.142 | -5.142 | 1.382 |
| 13 | -5.142 | -5.142 | -5.142 | 1.382 |
| 14 | 1.368 | -5.142 | -2.957 | -4.152 |
| 15 | -4.695 | 0.714 | -4.695 | 0.663 |
| 16 | 0.504 | -2.516 | -2.4 | 0.776 |
| 17 | -0.869 | -2.757 | -2.526 | 1.235 |
| 18 | -0.1 | -2.59 | -2.731 | 1.083 |
| 19 | -0.256 | -0.685 | -1.08 | 0.868 |