Model info
| Transcription factor | FOXA2 | ||||||||
| Model | FOXA2_HUMAN.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 11 | ||||||||
| Quality | A | ||||||||
| Consensus | TGTTTACWbWd | ||||||||
| wAUC | 0.9227652079749203 | ||||||||
| Best AUC | 0.951252559048231 | ||||||||
| Benchmark datasets | 5 | ||||||||
| Aligned words | 494 | ||||||||
| TF family | Forkhead box (FOX) factors{3.3.1} | ||||||||
| TF subfamily | FOXA{3.3.1.1} | ||||||||
| HGNC | 5022 | ||||||||
| EntrezGene | 3170 | ||||||||
| UniProt ID | FOXA2_HUMAN | ||||||||
| UniProt AC | Q9Y261 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 4.674 | 1.976 | 0.0 | 487.221 |
| 02 | 83.037 | 1.154 | 408.726 | 0.953 |
| 03 | 7.13 | 0.929 | 1.015 | 484.795 |
| 04 | 1.94 | 0.0 | 38.474 | 453.455 |
| 05 | 0.0 | 2.023 | 57.905 | 433.941 |
| 06 | 361.71 | 2.084 | 130.076 | 0.0 |
| 07 | 3.955 | 413.781 | 3.815 | 72.319 |
| 08 | 183.706 | 60.802 | 0.0 | 249.362 |
| 09 | 28.051 | 203.502 | 43.845 | 218.471 |
| 10 | 259.814 | 6.943 | 13.568 | 213.544 |
| 11 | 90.027 | 60.272 | 269.05 | 74.52 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -3.0 | -3.568 | -4.39 | 1.363 |
| 02 | -0.391 | -3.833 | 1.188 | -3.911 |
| 03 | -2.667 | -3.92 | -3.886 | 1.358 |
| 04 | -3.578 | -4.39 | -1.139 | 1.292 |
| 05 | -4.39 | -3.555 | -0.743 | 1.248 |
| 06 | 1.067 | -3.538 | 0.052 | -4.39 |
| 07 | -3.123 | 1.201 | -3.149 | -0.526 |
| 08 | 0.393 | -0.696 | -4.39 | 0.697 |
| 09 | -1.441 | 0.495 | -1.013 | 0.565 |
| 10 | 0.737 | -2.689 | -2.113 | 0.543 |
| 11 | -0.311 | -0.704 | 0.772 | -0.497 |