Model info
| Transcription factor | ESR2 | ||||||||
| Model | ESR2_HUMAN.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 18 | ||||||||
| Quality | A | ||||||||
| Consensus | vRGGdCWvGSTGMCCYbd | ||||||||
| wAUC | 0.889540041233866 | ||||||||
| Best AUC | 0.8911954804927003 | ||||||||
| Benchmark datasets | 2 | ||||||||
| Aligned words | 501 | ||||||||
| TF family | Steroid hormone receptors (NR3){2.1.1} | ||||||||
| TF subfamily | ER-like receptors (NR3A&B){2.1.1.2} | ||||||||
| HGNC | 3468 | ||||||||
| EntrezGene | 2100 | ||||||||
| UniProt ID | ESR2_HUMAN | ||||||||
| UniProt AC | Q92731 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 141.259 | 179.532 | 112.892 | 66.316 |
| 02 | 293.479 | 13.049 | 167.449 | 26.023 |
| 03 | 55.283 | 1.781 | 390.133 | 52.803 |
| 04 | 43.003 | 9.126 | 426.467 | 21.404 |
| 05 | 56.424 | 50.409 | 112.816 | 280.35 |
| 06 | 4.973 | 444.525 | 12.889 | 37.612 |
| 07 | 358.444 | 19.282 | 55.833 | 66.44 |
| 08 | 86.898 | 124.422 | 202.959 | 85.722 |
| 09 | 0.0 | 0.0 | 327.986 | 172.014 |
| 10 | 41.406 | 151.752 | 272.322 | 34.52 |
| 11 | 24.309 | 47.033 | 11.737 | 416.92 |
| 12 | 32.482 | 58.883 | 406.853 | 1.782 |
| 13 | 311.703 | 106.991 | 37.567 | 43.738 |
| 14 | 6.151 | 459.078 | 18.289 | 16.482 |
| 15 | 49.862 | 398.654 | 2.929 | 48.555 |
| 16 | 33.663 | 143.406 | 30.363 | 292.567 |
| 17 | 60.756 | 97.865 | 198.878 | 142.501 |
| 18 | 114.143 | 76.033 | 216.42 | 93.404 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.121 | 0.358 | -0.101 | -0.623 |
| 02 | 0.846 | -2.159 | 0.289 | -1.524 |
| 03 | -0.8 | -3.636 | 1.13 | -0.845 |
| 04 | -1.044 | -2.472 | 1.219 | -1.707 |
| 05 | -0.781 | -0.89 | -0.101 | 0.801 |
| 06 | -2.965 | 1.26 | -2.17 | -1.173 |
| 07 | 1.045 | -1.804 | -0.791 | -0.621 |
| 08 | -0.358 | -0.005 | 0.48 | -0.372 |
| 09 | -4.4 | -4.4 | 0.957 | 0.316 |
| 10 | -1.08 | 0.192 | 0.772 | -1.255 |
| 11 | -1.588 | -0.957 | -2.254 | 1.196 |
| 12 | -1.313 | -0.739 | 1.172 | -3.636 |
| 13 | 0.906 | -0.154 | -1.174 | -1.028 |
| 14 | -2.799 | 1.292 | -1.853 | -1.948 |
| 15 | -0.901 | 1.151 | -3.34 | -0.926 |
| 16 | -1.279 | 0.136 | -1.378 | 0.843 |
| 17 | -0.709 | -0.241 | 0.46 | 0.13 |
| 18 | -0.09 | -0.489 | 0.544 | -0.287 |