Model info
| Transcription factor | ERF | ||||||||
| Model | ERF_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 20 | ||||||||
| Quality | D | ||||||||
| Consensus | WnSdTKhSKTTSGRbAYTnC | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 7 | ||||||||
| TF family | Ets-related factors{3.5.2} | ||||||||
| TF subfamily | Ets-like factors{3.5.2.1} | ||||||||
| HGNC | 3444 | ||||||||
| EntrezGene | 2077 | ||||||||
| UniProt ID | ERF_HUMAN | ||||||||
| UniProt AC | P50548 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 3.5 | 0.5 | 0.5 | 2.5 |
| 02 | 3.5 | 1.5 | 0.5 | 1.5 |
| 03 | 1.25 | 3.25 | 2.25 | 0.25 |
| 04 | 4.25 | 0.25 | 1.25 | 1.25 |
| 05 | 0.0 | 0.0 | 3.0 | 4.0 |
| 06 | 1.0 | 0.0 | 4.0 | 2.0 |
| 07 | 3.0 | 1.0 | 0.0 | 3.0 |
| 08 | 0.0 | 2.0 | 4.0 | 1.0 |
| 09 | 1.0 | 0.0 | 2.0 | 4.0 |
| 10 | 0.0 | 0.0 | 1.0 | 6.0 |
| 11 | 3.0 | 0.0 | 0.0 | 4.0 |
| 12 | 0.0 | 4.0 | 2.0 | 1.0 |
| 13 | 1.0 | 0.0 | 6.0 | 0.0 |
| 14 | 4.0 | 0.0 | 2.0 | 1.0 |
| 15 | 0.0 | 3.0 | 2.0 | 2.0 |
| 16 | 5.0 | 0.0 | 2.0 | 0.0 |
| 17 | 0.25 | 3.25 | 1.25 | 2.25 |
| 18 | 0.25 | 1.25 | 0.25 | 5.25 |
| 19 | 0.5 | 1.5 | 1.5 | 3.5 |
| 20 | 0.5 | 5.5 | 0.5 | 0.5 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.578 | -0.819 | -0.819 | 0.289 |
| 02 | 0.578 | -0.119 | -0.819 | -0.119 |
| 03 | -0.253 | 0.513 | 0.202 | -1.111 |
| 04 | 0.75 | -1.111 | -0.253 | -0.253 |
| 05 | -1.525 | -1.525 | 0.444 | 0.696 |
| 06 | -0.408 | -1.525 | 0.696 | 0.106 |
| 07 | 0.444 | -0.408 | -1.525 | 0.444 |
| 08 | -1.525 | 0.106 | 0.696 | -0.408 |
| 09 | -0.408 | -1.525 | 0.106 | 0.696 |
| 10 | -1.525 | -1.525 | -0.408 | 1.065 |
| 11 | 0.444 | -1.525 | -1.525 | 0.696 |
| 12 | -1.525 | 0.696 | 0.106 | -0.408 |
| 13 | -0.408 | -1.525 | 1.065 | -1.525 |
| 14 | 0.696 | -1.525 | 0.106 | -0.408 |
| 15 | -1.525 | 0.444 | 0.106 | 0.106 |
| 16 | 0.897 | -1.525 | 0.106 | -1.525 |
| 17 | -1.111 | 0.513 | -0.253 | 0.202 |
| 18 | -1.111 | -0.253 | -1.111 | 0.942 |
| 19 | -0.819 | -0.119 | -0.119 | 0.578 |
| 20 | -0.819 | 0.985 | -0.819 | -0.819 |