ELK4_HUMAN.H10DI.A motif - HOmo sapiens COmprehensive MOdel COllection

Model info

Transcription factor

ELK4

Model

ELK4_HUMAN.H10DI.A

Model type

Dinucleotide PWM

LOGO

LOGO (reverse complement)

Origin

HT-SELEX

Model length

12

Quality

A

Consensus

ndMMGGAARYvn

wAUC

0.8149096513366921

Best AUC

0.9257179199904464

Benchmark datasets

4

Aligned words

11025

TF family

Ets-related factors{3.5.2}

TF subfamily

Elk-like factors{3.5.2.2}

HGNC

3326

EntrezGene

2005

UniProt ID

ELK4_HUMAN

UniProt AC

P28324

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	9.1591
0.0005	11.2421
0.0001	14.5901

PCM

	AA	AC	AG	AT	CA	CC	CG	CT	GA	GC	GG	GT	TA	TC	TG	TT
01	2288.438	324.188	492.438	374.938	1171.438	309.188	448.438	383.938	1530.438	344.188	629.438	422.938	1059.438	310.188	506.438	427.938
02	586.25	4644.0	495.75	323.75	279.25	483.0	264.75	260.75	344.25	1069.0	374.75	288.75	286.25	747.0	313.75	262.75
03	285.063	716.813	250.813	243.313	552.063	5853.813	273.813	263.313	270.063	702.813	244.813	231.313	245.063	415.813	235.813	239.313
04	7.0	9.5	1324.5	11.25	19.0	20.5	7636.5	13.25	7.0	0.5	993.5	4.25	4.0	2.5	963.5	7.25
05	0.0	1.0	34.0	2.0	2.0	1.0	29.0	1.0	28.0	18.0	10723.0	149.0	1.0	2.0	32.0	1.0
06	29.0	1.0	0.0	1.0	22.0	0.0	0.0	0.0	10770.75	27.75	5.75	13.75	151.0	0.0	1.0	1.0
07	9787.188	62.188	21.188	1102.188	26.188	1.188	0.188	1.188	6.188	0.188	0.188	0.188	10.188	0.188	0.188	5.188
08	2729.438	185.438	6846.438	68.438	14.188	3.188	43.188	3.188	4.188	3.188	14.188	0.188	149.438	21.438	921.438	16.438
09	50.063	892.063	89.063	1866.063	22.813	47.813	14.813	127.813	145.813	1288.813	181.813	6208.813	10.563	14.563	11.563	51.563
10	52.063	51.063	86.063	40.063	590.313	337.313	919.313	396.313	96.063	63.063	83.063	55.063	1817.813	1613.813	3303.813	1518.813
11	731.813	634.813	811.813	377.813	618.813	643.813	516.813	285.813	1170.313	1225.313	1205.313	791.313	592.063	426.063	700.063	292.063

PWM

	AA	AC	AG	AT	CA	CC	CG	CT	GA	GC	GG	GT	TA	TC	TG	TT
01	1.2	-0.753	-0.336	-0.608	0.53	-0.8	-0.429	-0.584	0.798	-0.693	-0.09	-0.487	0.43	-0.797	-0.308	-0.476
02	-0.161	1.907	-0.329	-0.754	-0.902	-0.355	-0.955	-0.97	-0.693	0.439	-0.608	-0.869	-0.877	0.081	-0.786	-0.963
03	-0.881	0.04	-1.009	-1.039	-0.221	2.139	-0.922	-0.961	-0.935	0.02	-1.033	-1.09	-1.032	-0.504	-1.071	-1.056
04	-4.51	-4.225	0.653	-4.065	-3.561	-3.488	2.405	-3.909	-4.51	-6.458	0.366	-4.961	-5.014	-5.411	0.335	-4.478
05	-7.078	-6.078	-2.993	-5.588	-5.588	-6.078	-3.149	-6.078	-3.183	-3.614	2.744	-1.528	-6.078	-5.588	-3.052	-6.078
06	-3.149	-6.078	-7.078	-6.078	-3.419	-7.078	-7.078	-7.078	2.749	-3.192	-4.691	-3.874	-1.515	-7.078	-6.078	-6.078
07	2.653	-2.397	-3.456	0.469	-3.249	-5.966	-6.798	-5.966	-4.624	-6.798	-6.798	-6.798	-4.159	-6.798	-6.798	-4.784
08	1.376	-1.31	2.295	-2.302	-3.844	-5.209	-2.757	-5.209	-4.974	-5.209	-3.844	-6.798	-1.525	-3.444	0.29	-3.702
09	-2.611	0.258	-2.04	0.996	-3.384	-2.657	-3.802	-1.681	-1.55	0.626	-1.33	2.198	-4.125	-3.818	-4.039	-2.582
10	-2.573	-2.592	-2.074	-2.831	-0.154	-0.713	0.288	-0.552	-1.965	-2.383	-2.11	-2.517	0.97	0.851	1.567	0.79
11	0.06	-0.082	0.164	-0.6	-0.107	-0.068	-0.287	-0.879	0.529	0.575	0.559	0.138	-0.151	-0.48	0.016	-0.857