Model info
Transcription factorE2f1
ModelE2F1_MOUSE.H10MO.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length14
Quality
A
ConsensusndndGGCGSSRRRn
wAUC
Best AUC
Benchmark datasets
Aligned words2136
TF familyE2F-related factors{3.3.2}
TF subfamilyE2F{3.3.2.1}
MGI101941
EntrezGene13555
UniProt IDE2F1_MOUSE
UniProt ACQ61501
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.7041
0.0005 5.5371
0.0001 7.2401
PCM
ACGT
01808.802342.834503.592479.772
02732.47210.48701.85490.199
03650.474349.478452.38682.668
04529.865155.328549.412900.395
05199.015143.7421770.26121.981
0619.722113.8111986.19215.276
07146.3961927.58633.20327.814
08109.66319.7541898.695106.887
09103.429790.4111210.3430.82
10148.786302.7061652.7730.738
111666.67150.068288.72429.538
121522.05582.818459.51370.614
131284.8183.173561.142105.885
14679.358473.731675.99305.921
PWM
ACGT
010.414-0.441-0.058-0.106
020.316-0.9250.273-0.085
030.197-0.422-0.1650.245
04-0.007-1.2260.0290.521
05-0.981-1.3021.196-3.11
06-3.209-1.5321.311-3.439
07-1.2841.282-2.725-2.891
08-1.569-3.2081.266-1.594
09-1.6260.3910.817-2.795
10-1.268-0.5641.128-2.798
111.136-1.26-0.611-2.835
121.046-1.844-0.149-2.0
130.876-1.0630.05-1.603
140.24-0.1190.235-0.554