Model info
| Transcription factor | Creb1 | ||||||||
| Model | CREB1_MOUSE.H10MO.B | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 9 | ||||||||
| Quality | B | ||||||||
| Consensus | vTGACGYvd | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 308 | ||||||||
| TF family | CREB-related factors{1.1.7} | ||||||||
| TF subfamily | CREB-like factors{1.1.7.1} | ||||||||
| MGI | 88494 | ||||||||
| EntrezGene | 12912 | ||||||||
| UniProt ID | CREB1_MOUSE | ||||||||
| UniProt AC | Q01147 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 68.972 | 57.309 | 132.881 | 26.515 |
| 02 | 0.0 | 0.79 | 0.614 | 284.273 |
| 03 | 0.702 | 0.0 | 280.588 | 4.387 |
| 04 | 283.396 | 0.702 | 1.579 | 0.0 |
| 05 | 0.0 | 251.705 | 19.145 | 14.827 |
| 06 | 5.176 | 2.018 | 274.886 | 3.597 |
| 07 | 13.774 | 73.71 | 6.054 | 192.139 |
| 08 | 79.393 | 149.325 | 39.587 | 17.371 |
| 09 | 165.318 | 35.946 | 43.842 | 40.571 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.034 | -0.215 | 0.612 | -0.959 |
| 02 | -3.942 | -3.498 | -3.581 | 1.367 |
| 03 | -3.539 | -3.942 | 1.354 | -2.53 |
| 04 | 1.364 | -3.539 | -3.192 | -3.942 |
| 05 | -3.942 | 1.246 | -1.265 | -1.501 |
| 06 | -2.403 | -3.055 | 1.333 | -2.677 |
| 07 | -1.568 | 0.031 | -2.278 | 0.977 |
| 08 | 0.104 | 0.727 | -0.575 | -1.355 |
| 09 | 0.828 | -0.668 | -0.476 | -0.551 |