CEBPB_HUMAN.H10DI.A motif - HOmo sapiens COmprehensive MOdel COllection

Model info

Transcription factor

CEBPB

Model

CEBPB_HUMAN.H10DI.A

Model type

Dinucleotide PWM

LOGO

LOGO (reverse complement)

Origin

ChIP-Seq

Model length

12

Quality

A

Consensus

nRTTGCdYAAYh

wAUC

0.9425690387646967

Best AUC

0.9656326602270917

Benchmark datasets

19

Aligned words

516

TF family

C/EBP-related{1.1.8}

TF subfamily

C/EBP{1.1.8.1}

HGNC

1834

EntrezGene

1051

UniProt ID

CEBPB_HUMAN

UniProt AC

P17676

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	7.8031
0.0005	10.2701
0.0001	15.0384

PCM

	AA	AC	AG	AT	CA	CC	CG	CT	GA	GC	GG	GT	TA	TC	TG	TT
01	45.394	8.518	43.268	4.968	62.26	12.281	10.171	0.0	99.96	6.591	43.809	9.696	83.162	18.044	50.814	1.064
02	0.0	0.0	3.665	287.111	0.0	0.0	0.0	45.434	0.0	0.0	0.838	147.224	0.0	0.0	0.0	15.727
03	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	4.503	0.0	3.829	0.908	490.76
04	0.0	0.0	0.0	0.0	0.0	0.0	2.94	0.89	0.0	0.0	0.908	0.0	36.546	1.092	397.982	59.642
05	1.845	34.702	0.0	0.0	0.0	1.092	0.0	0.0	0.0	394.415	1.898	5.518	0.0	57.923	0.0	2.609
06	0.0	0.944	0.0	0.901	255.222	47.845	117.541	67.523	1.898	0.0	0.0	0.0	4.505	1.79	0.935	0.897
07	51.074	113.178	4.828	92.545	13.085	20.986	0.0	16.508	25.973	40.711	0.0	51.791	5.769	36.858	0.865	25.828
08	41.664	52.553	0.0	1.685	190.516	21.218	0.0	0.0	2.906	2.787	0.0	0.0	82.344	103.351	0.977	0.0
09	311.546	2.077	2.937	0.869	177.255	1.725	0.0	0.928	0.977	0.0	0.0	0.0	1.685	0.0	0.0	0.0
10	6.745	183.15	84.278	217.29	0.0	2.077	0.0	1.725	0.0	0.0	1.0	1.938	0.0	0.0	0.0	1.798
11	2.89	2.903	0.953	0.0	68.902	58.275	5.553	52.497	27.19	31.27	16.176	10.641	56.43	83.743	34.247	48.33

PWM

	AA	AC	AG	AT	CA	CC	CG	CT	GA	GC	GG	GT	TA	TC	TG	TT
01	0.37	-1.268	0.322	-1.776	0.683	-0.915	-1.097	-4.4	1.154	-1.511	0.334	-1.143	0.971	-0.54	0.481	-3.081
02	-4.4	-4.4	-2.055	2.207	-4.4	-4.4	-4.4	0.37	-4.4	-4.4	-3.251	1.54	-4.4	-4.4	-4.4	-0.675
03	-4.4	-4.4	-4.4	-4.4	-4.4	-4.4	-4.4	-4.4	-4.4	-4.4	-4.4	-1.867	-4.4	-2.015	-3.195	2.742
04	-4.4	-4.4	-4.4	-4.4	-4.4	-4.4	-2.252	-3.209	-4.4	-4.4	-3.195	-4.4	0.155	-3.062	2.533	0.64
05	-2.651	0.104	-4.4	-4.4	-4.4	-3.062	-4.4	-4.4	-4.4	2.524	-2.628	-1.678	-4.4	0.611	-4.4	-2.357
06	-4.4	-3.167	-4.4	-3.2	2.089	0.422	1.316	0.764	-2.628	-4.4	-4.4	-4.4	-1.866	-2.676	-3.174	-3.203
07	0.486	1.278	-1.803	1.078	-0.854	-0.392	-4.4	-0.627	-0.182	0.262	-4.4	0.5	-1.637	0.163	-3.228	-0.188
08	0.285	0.515	-4.4	-2.725	1.797	-0.381	-4.4	-4.4	-2.262	-2.299	-4.4	-4.4	0.961	1.188	-3.143	-4.4
09	2.288	-2.552	-2.253	-3.225	1.725	-2.706	-4.4	-3.179	-3.143	-4.4	-4.4	-4.4	-2.725	-4.4	-4.4	-4.4
10	-1.49	1.758	0.984	1.929	-4.4	-2.552	-4.4	-2.706	-4.4	-4.4	-3.127	-2.61	-4.4	-4.4	-4.4	-2.672
11	-2.267	-2.263	-3.161	-4.4	0.784	0.617	-1.672	0.514	-0.137	0.001	-0.647	-1.054	0.585	0.978	0.091	0.432