Model info
| Transcription factor | ALX3 | ||||||||
| Model | ALX3_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Consensus | WWAKYTAATTA | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 8583 | ||||||||
| TF family | Paired-related HD factors{3.1.3} | ||||||||
| TF subfamily | ALX{3.1.3.1} | ||||||||
| HGNC | 449 | ||||||||
| EntrezGene | 257 | ||||||||
| UniProt ID | ALX3_HUMAN | ||||||||
| UniProt AC | O95076 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 794.392 | 472.55 | 375.755 | 6593.249 |
| 02 | 6070.675 | 250.902 | 504.181 | 1410.188 |
| 03 | 7728.697 | 155.101 | 167.201 | 184.946 |
| 04 | 417.858 | 1088.161 | 1306.983 | 5422.944 |
| 05 | 176.866 | 3394.706 | 736.661 | 3927.712 |
| 06 | 0.0 | 2430.407 | 13.713 | 5791.826 |
| 07 | 7138.134 | 137.126 | 904.223 | 56.463 |
| 08 | 8197.228 | 1.613 | 33.071 | 4.033 |
| 09 | 0.202 | 1.008 | 0.202 | 8234.534 |
| 10 | 421.056 | 104.861 | 7.26 | 7702.769 |
| 11 | 7402.663 | 103.262 | 241.194 | 488.827 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.951 | -1.468 | -1.696 | 1.163 |
| 02 | 1.081 | -2.097 | -1.404 | -0.378 |
| 03 | 1.322 | -2.573 | -2.498 | -2.399 |
| 04 | -1.591 | -0.637 | -0.454 | 0.968 |
| 05 | -2.443 | 0.5 | -1.026 | 0.645 |
| 06 | -6.818 | 0.166 | -4.861 | 1.034 |
| 07 | 1.242 | -2.694 | -0.821 | -3.558 |
| 08 | 1.381 | -6.279 | -4.066 | -5.793 |
| 09 | -6.733 | -6.449 | -6.733 | 1.385 |
| 10 | -1.583 | -2.957 | -5.378 | 1.319 |
| 11 | 1.279 | -2.972 | -2.136 | -1.434 |