Model info
| Transcription factor | ZNF410 | ||||||||
| Model | ZN410_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 13 | ||||||||
| Quality | D | ||||||||
| Consensus | TATTATGGGATGb | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 1227 | ||||||||
| TF family | More than 3 adjacent zinc finger factors{2.3.3} | ||||||||
| TF subfamily | MTF1-like factors{2.3.3.24} | ||||||||
| HGNC | 20144 | ||||||||
| EntrezGene | 57862 | ||||||||
| UniProt ID | ZN410_HUMAN | ||||||||
| UniProt AC | Q86VK4 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 28.0 | 45.0 | 20.0 | 1134.0 |
| 02 | 1199.0 | 9.0 | 10.0 | 9.0 |
| 03 | 5.75 | 6.75 | 5.75 | 1208.75 |
| 04 | 4.0 | 4.0 | 4.0 | 1215.0 |
| 05 | 1216.75 | 2.75 | 3.75 | 3.75 |
| 06 | 2.25 | 2.25 | 1.25 | 1221.25 |
| 07 | 0.75 | 0.75 | 1224.75 | 0.75 |
| 08 | 2.0 | 1.0 | 1223.0 | 1.0 |
| 09 | 1.0 | 1.0 | 1187.0 | 38.0 |
| 10 | 1133.25 | 68.25 | 10.25 | 15.25 |
| 11 | 5.25 | 3.25 | 3.25 | 1215.25 |
| 12 | 141.75 | 29.75 | 1025.75 | 29.75 |
| 13 | 40.25 | 168.25 | 551.25 | 467.25 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -2.338 | -1.886 | -2.651 | 1.303 |
| 02 | 1.359 | -3.354 | -3.266 | -3.354 |
| 03 | -3.713 | -3.588 | -3.713 | 1.367 |
| 04 | -3.978 | -3.978 | -3.978 | 1.372 |
| 05 | 1.374 | -4.222 | -4.022 | -4.022 |
| 06 | -4.339 | -4.339 | -4.624 | 1.377 |
| 07 | -4.804 | -4.804 | 1.38 | -4.804 |
| 08 | -4.403 | -4.71 | 1.379 | -4.71 |
| 09 | -4.71 | -4.71 | 1.349 | -2.048 |
| 10 | 1.303 | -1.483 | -3.245 | -2.897 |
| 11 | -3.782 | -4.117 | -4.117 | 1.372 |
| 12 | -0.765 | -2.281 | 1.203 | -2.281 |
| 13 | -1.993 | -0.596 | 0.584 | 0.419 |