Model info
| Transcription factor | HIVEP2 | ||||||||
| Model | ZEP2_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 14 | ||||||||
| Quality | D | ||||||||
| Consensus | KSYdbGGWAASnSS | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 16 | ||||||||
| TF family | Factors with multiple dispersed zinc fingers{2.3.4} | ||||||||
| TF subfamily | HIV EP-factors{2.3.4.5} | ||||||||
| HGNC | 4921 | ||||||||
| EntrezGene | 3097 | ||||||||
| UniProt ID | ZEP2_HUMAN | ||||||||
| UniProt AC | P31629 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1.443 | 0.619 | 10.021 | 3.918 |
| 02 | 0.825 | 3.299 | 8.742 | 3.134 |
| 03 | 2.474 | 4.948 | 0.0 | 8.577 |
| 04 | 5.361 | 0.825 | 4.784 | 5.031 |
| 05 | 2.062 | 3.299 | 7.753 | 2.887 |
| 06 | 3.299 | 0.0 | 12.701 | 0.0 |
| 07 | 3.299 | 0.0 | 12.701 | 0.0 |
| 08 | 7.093 | 2.887 | 0.0 | 6.021 |
| 09 | 14.351 | 0.825 | 0.825 | 0.0 |
| 10 | 12.866 | 0.0 | 1.485 | 1.649 |
| 11 | 0.0 | 9.072 | 3.959 | 2.969 |
| 12 | 2.68 | 7.134 | 2.68 | 3.505 |
| 13 | 0.825 | 9.402 | 5.773 | 0.0 |
| 14 | 0.412 | 8.742 | 6.433 | 0.412 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.787 | -1.275 | 0.825 | -0.018 |
| 02 | -1.129 | -0.162 | 0.698 | -0.204 |
| 03 | -0.393 | 0.184 | -1.913 | 0.681 |
| 04 | 0.255 | -1.129 | 0.154 | 0.199 |
| 05 | -0.533 | -0.162 | 0.588 | -0.271 |
| 06 | -0.162 | -1.913 | 1.049 | -1.913 |
| 07 | -0.162 | -1.913 | 1.049 | -1.913 |
| 08 | 0.506 | -0.271 | -1.913 | 0.358 |
| 09 | 1.165 | -1.129 | -1.129 | -1.913 |
| 10 | 1.061 | -1.913 | -0.768 | -0.695 |
| 11 | -1.913 | 0.733 | -0.009 | -0.248 |
| 12 | -0.33 | 0.511 | -0.33 | -0.111 |
| 13 | -1.129 | 0.766 | 0.321 | -1.913 |
| 14 | -1.446 | 0.698 | 0.418 | -1.446 |