Model info
| Transcription factor | Stat4 | ||||||||
| Model | STAT4_MOUSE.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 11 | ||||||||
| Quality | A | ||||||||
| Consensus | hTTCYTdKAAv | ||||||||
| wAUC | 0.8494972594919306 | ||||||||
| Best AUC | 0.8735780469016585 | ||||||||
| Benchmark datasets | 2 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | STAT factors{6.2.1} | ||||||||
| TF subfamily | STAT4{6.2.1.0.4} | ||||||||
| MGI | 103062 | ||||||||
| EntrezGene | 20849 | ||||||||
| UniProt ID | STAT4_MOUSE | ||||||||
| UniProt AC | P42228 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 49.792 | 149.472 | 45.095 | 255.641 |
| 02 | 2.745 | 2.003 | 0.943 | 494.309 |
| 03 | 6.957 | 10.156 | 35.982 | 446.905 |
| 04 | 31.323 | 439.074 | 2.036 | 27.567 |
| 05 | 19.724 | 341.317 | 5.539 | 133.42 |
| 06 | 0.0 | 233.227 | 0.0 | 266.773 |
| 07 | 161.598 | 24.092 | 242.32 | 71.99 |
| 08 | 8.973 | 20.826 | 385.587 | 84.615 |
| 09 | 416.33 | 71.991 | 0.872 | 10.807 |
| 10 | 466.593 | 1.824 | 17.677 | 13.906 |
| 11 | 227.037 | 72.339 | 154.152 | 46.472 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | -0.902 | 0.177 | -0.998 | 0.709 |
| 02 | -3.382 | -3.572 | -3.926 | 1.366 |
| 03 | -2.699 | -2.38 | -1.215 | 1.265 |
| 04 | -1.348 | 1.248 | -3.563 | -1.469 |
| 05 | -1.783 | 0.997 | -2.882 | 0.064 |
| 06 | -4.4 | 0.618 | -4.4 | 0.752 |
| 07 | 0.254 | -1.596 | 0.656 | -0.543 |
| 08 | -2.487 | -1.733 | 1.118 | -0.384 |
| 09 | 1.195 | -0.543 | -3.954 | -2.326 |
| 10 | 1.308 | -3.624 | -1.884 | -2.102 |
| 11 | 0.591 | -0.538 | 0.207 | -0.969 |