Model info
| Transcription factor | SP1 | ||||||||
| Model | SP1_HUMAN.H10DI.C | ||||||||
| Model type | Dinucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 23 | ||||||||
| Quality | C | ||||||||
| Consensus | vvvvvvvvnRKGGGYGGRRhbdv | ||||||||
| wAUC | 0.7513598060634963 | ||||||||
| Best AUC | 0.7934120353319566 | ||||||||
| Benchmark datasets | 6 | ||||||||
| Aligned words | 513 | ||||||||
| TF family | Three-zinc finger Krüppel-related factors{2.3.1} | ||||||||
| TF subfamily | Sp1-like factors{2.3.1.1} | ||||||||
| HGNC | 11205 | ||||||||
| EntrezGene | 6667 | ||||||||
| UniProt ID | SP1_HUMAN | ||||||||
| UniProt AC | P08047 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 01 | 18.509 | 8.294 | 64.882 | 5.342 | 23.572 | 28.413 | 41.803 | 25.543 | 34.572 | 33.452 | 114.769 | 22.604 | 10.462 | 7.183 | 49.001 | 11.6 |
| 02 | 7.196 | 13.931 | 56.354 | 9.633 | 10.487 | 19.961 | 35.213 | 11.681 | 59.717 | 79.42 | 115.098 | 16.219 | 2.926 | 32.427 | 23.124 | 6.611 |
| 03 | 31.583 | 14.989 | 31.039 | 2.715 | 38.286 | 43.587 | 48.146 | 15.72 | 36.236 | 90.914 | 96.312 | 6.328 | 5.177 | 18.528 | 18.384 | 2.055 |
| 04 | 18.486 | 13.036 | 56.719 | 23.041 | 48.327 | 33.4 | 72.914 | 13.378 | 44.219 | 25.589 | 108.961 | 15.111 | 4.577 | 7.26 | 8.905 | 6.075 |
| 05 | 25.861 | 17.818 | 68.034 | 3.896 | 15.403 | 17.149 | 32.291 | 14.443 | 36.947 | 67.33 | 124.364 | 18.858 | 8.718 | 8.226 | 36.848 | 3.813 |
| 06 | 12.871 | 7.588 | 51.102 | 15.368 | 21.106 | 31.154 | 45.708 | 12.554 | 29.07 | 33.831 | 179.734 | 18.902 | 0.949 | 12.439 | 19.037 | 8.586 |
| 07 | 16.288 | 16.346 | 25.041 | 6.321 | 13.974 | 23.773 | 37.733 | 9.531 | 89.009 | 67.039 | 120.476 | 19.057 | 10.024 | 17.624 | 22.557 | 5.205 |
| 08 | 59.21 | 8.336 | 41.735 | 20.015 | 34.47 | 31.342 | 29.833 | 29.138 | 72.708 | 51.822 | 51.464 | 29.814 | 2.043 | 6.52 | 18.954 | 12.598 |
| 09 | 33.141 | 4.564 | 112.527 | 18.198 | 18.047 | 5.043 | 51.756 | 23.174 | 37.619 | 10.643 | 77.62 | 16.103 | 6.855 | 1.219 | 77.537 | 5.954 |
| 10 | 6.53 | 0.0 | 81.39 | 7.742 | 2.741 | 0.0 | 17.01 | 1.717 | 33.179 | 4.208 | 212.964 | 69.09 | 3.763 | 1.899 | 50.346 | 7.421 |
| 11 | 10.753 | 0.0 | 35.46 | 0.0 | 3.271 | 0.0 | 2.836 | 0.0 | 76.302 | 0.89 | 276.543 | 7.976 | 5.015 | 0.967 | 79.092 | 0.896 |
| 12 | 8.482 | 2.86 | 83.999 | 0.0 | 0.0 | 0.967 | 0.89 | 0.0 | 41.844 | 5.334 | 345.825 | 0.928 | 1.218 | 0.0 | 5.774 | 1.879 |
| 13 | 14.34 | 2.167 | 32.823 | 2.215 | 1.813 | 0.0 | 7.348 | 0.0 | 4.144 | 11.153 | 419.176 | 2.014 | 0.0 | 0.0 | 2.808 | 0.0 |
| 14 | 0.844 | 4.355 | 1.13 | 13.968 | 5.603 | 5.998 | 0.0 | 1.719 | 53.755 | 333.726 | 0.868 | 73.806 | 0.974 | 2.407 | 0.0 | 0.847 |
| 15 | 5.113 | 3.036 | 52.107 | 0.92 | 19.818 | 3.639 | 313.662 | 9.367 | 1.999 | 0.0 | 0.0 | 0.0 | 0.918 | 0.884 | 85.292 | 3.246 |
| 16 | 0.998 | 0.0 | 26.85 | 0.0 | 0.884 | 0.0 | 4.117 | 2.559 | 3.067 | 11.063 | 405.805 | 31.127 | 0.0 | 0.896 | 11.795 | 0.842 |
| 17 | 1.74 | 0.998 | 2.21 | 0.0 | 2.236 | 0.0 | 6.911 | 2.812 | 108.737 | 15.107 | 300.859 | 23.864 | 2.74 | 0.0 | 28.155 | 3.633 |
| 18 | 32.023 | 3.922 | 79.507 | 0.0 | 0.879 | 5.708 | 7.331 | 2.187 | 38.398 | 37.031 | 246.641 | 16.064 | 1.245 | 2.792 | 24.058 | 2.214 |
| 19 | 8.713 | 33.662 | 4.437 | 25.733 | 4.652 | 22.234 | 15.303 | 7.263 | 61.793 | 232.39 | 26.356 | 36.998 | 1.183 | 5.384 | 9.388 | 4.51 |
| 20 | 16.27 | 19.007 | 36.544 | 4.519 | 11.831 | 155.201 | 77.95 | 48.688 | 6.048 | 22.265 | 21.662 | 5.509 | 3.61 | 25.878 | 40.022 | 4.995 |
| 21 | 10.978 | 0.938 | 22.31 | 3.533 | 72.649 | 27.348 | 40.731 | 81.624 | 22.782 | 22.084 | 111.261 | 20.051 | 8.786 | 8.897 | 33.108 | 12.919 |
| 22 | 39.955 | 15.482 | 48.263 | 11.496 | 12.387 | 5.005 | 22.583 | 19.293 | 62.581 | 45.792 | 77.175 | 21.862 | 22.196 | 25.415 | 56.029 | 14.486 |
PWM
| AA | AC | AG | AT | CA | CC | CG | CT | GA | GC | GG | GT | TA | TC | TG | TT | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 01 | -0.515 | -1.293 | 0.724 | -1.709 | -0.278 | -0.094 | 0.288 | -0.199 | 0.1 | 0.067 | 1.292 | -0.319 | -1.07 | -1.43 | 0.445 | -0.97 |
| 02 | -1.428 | -0.793 | 0.584 | -1.15 | -1.068 | -0.441 | 0.118 | -0.964 | 0.642 | 0.925 | 1.295 | -0.645 | -2.256 | 0.037 | -0.297 | -1.508 |
| 03 | 0.01 | -0.721 | -0.007 | -2.322 | 0.201 | 0.329 | 0.428 | -0.675 | 0.146 | 1.06 | 1.117 | -1.55 | -1.738 | -0.514 | -0.522 | -2.561 |
| 04 | -0.517 | -0.857 | 0.591 | -0.3 | 0.432 | 0.066 | 0.84 | -0.832 | 0.344 | -0.197 | 1.24 | -0.714 | -1.852 | -1.42 | -1.225 | -1.588 |
| 05 | -0.187 | -0.553 | 0.771 | -1.999 | -0.695 | -0.59 | 0.032 | -0.758 | 0.166 | 0.761 | 1.372 | -0.497 | -1.245 | -1.301 | 0.163 | -2.019 |
| 06 | -0.87 | -1.378 | 0.487 | -0.697 | -0.387 | -0.003 | 0.376 | -0.894 | -0.071 | 0.078 | 1.739 | -0.495 | -3.164 | -0.903 | -0.488 | -1.26 |
| 07 | -0.64 | -0.637 | -0.218 | -1.551 | -0.79 | -0.27 | 0.186 | -1.16 | 1.039 | 0.757 | 1.34 | -0.487 | -1.111 | -0.563 | -0.321 | -1.733 |
| 08 | 0.633 | -1.288 | 0.286 | -0.439 | 0.097 | 0.003 | -0.046 | -0.069 | 0.837 | 0.501 | 0.494 | -0.046 | -2.566 | -1.522 | -0.492 | -0.89 |
| 09 | 0.058 | -1.855 | 1.272 | -0.532 | -0.54 | -1.762 | 0.5 | -0.295 | 0.183 | -1.054 | 0.902 | -0.652 | -1.474 | -2.98 | 0.901 | -1.607 |
| 10 | -1.52 | -4.4 | 0.95 | -1.359 | -2.313 | -4.4 | -0.598 | -2.71 | 0.059 | -1.929 | 1.909 | 0.787 | -2.031 | -2.627 | 0.472 | -1.399 |
| 11 | -1.044 | -4.4 | 0.125 | -4.4 | -2.157 | -4.4 | -2.284 | -4.4 | 0.885 | -3.209 | 2.169 | -1.33 | -1.767 | -3.15 | 0.921 | -3.204 |
| 12 | -1.272 | -2.276 | 0.981 | -4.4 | -4.4 | -3.15 | -3.209 | -4.4 | 0.289 | -1.71 | 2.393 | -3.179 | -2.98 | -4.4 | -1.636 | -2.636 |
| 13 | -0.765 | -2.516 | 0.049 | -2.498 | -2.665 | -4.4 | -1.408 | -4.4 | -1.943 | -1.008 | 2.585 | -2.578 | -4.4 | -4.4 | -2.292 | -4.4 |
| 14 | -3.245 | -1.898 | -3.036 | -0.79 | -1.664 | -1.6 | -4.4 | -2.709 | 0.537 | 2.357 | -3.226 | 0.852 | -3.145 | -2.426 | -4.4 | -3.243 |
| 15 | -1.749 | -2.224 | 0.506 | -3.186 | -0.448 | -2.061 | 2.295 | -1.177 | -2.584 | -4.4 | -4.4 | -4.4 | -3.187 | -3.214 | 0.996 | -2.164 |
| 16 | -3.128 | -4.4 | -0.15 | -4.4 | -3.214 | -4.4 | -1.949 | -2.374 | -2.215 | -1.016 | 2.552 | -0.004 | -4.4 | -3.204 | -0.954 | -3.247 |
| 17 | -2.699 | -3.128 | -2.499 | -4.4 | -2.49 | -4.4 | -1.467 | -2.291 | 1.238 | -0.714 | 2.254 | -0.266 | -2.314 | -4.4 | -0.103 | -2.063 |
| 18 | 0.024 | -1.993 | 0.926 | -4.4 | -3.217 | -1.647 | -1.411 | -2.508 | 0.204 | 0.168 | 2.055 | -0.654 | -2.964 | -2.297 | -0.258 | -2.498 |
| 19 | -1.246 | 0.073 | -1.88 | -0.192 | -1.837 | -0.335 | -0.701 | -1.419 | 0.676 | 1.996 | -0.168 | 0.167 | -3.002 | -1.701 | -1.174 | -1.865 |
| 20 | -0.641 | -0.489 | 0.155 | -1.864 | -0.951 | 1.593 | 0.907 | 0.439 | -1.592 | -0.334 | -0.361 | -1.68 | -2.068 | -0.186 | 0.245 | -1.771 |
| 21 | -1.024 | -3.172 | -0.332 | -2.088 | 0.837 | -0.132 | 0.262 | 0.952 | -0.311 | -0.342 | 1.261 | -0.437 | -1.238 | -1.226 | 0.057 | -0.866 |
| 22 | 0.243 | -0.69 | 0.43 | -0.979 | -0.907 | -1.769 | -0.32 | -0.475 | 0.688 | 0.378 | 0.897 | -0.352 | -0.337 | -0.204 | 0.578 | -0.755 |