Model info
Transcription factorPlag1
ModelPLAG1_MOUSE.H10MO.S
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length13
Quality
S
ConsensusRvdRGGGGSnnbv
wAUC
Best AUC
Benchmark datasets
Aligned words25
TF familyMore than 3 adjacent zinc finger factors{2.3.3}
TF subfamilyPLAG factors{2.3.3.25}
MGI1891916
EntrezGene56711
UniProt IDPLAG1_MOUSE
UniProt ACQ9QYE0
CommentSecondary motif.
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.0231
0.0005 5.6871
0.0001 7.0001
PCM
ACGT
0117.01.05.02.0
027.05.012.01.0
039.01.08.07.0
046.00.016.03.0
052.02.020.01.0
064.00.021.00.0
070.00.025.00.0
080.00.025.00.0
091.014.010.00.0
106.09.01.09.0
111.010.07.07.0
123.06.05.011.0
1312.06.04.03.0
PWM
ACGT
010.926-1.363-0.195-0.922
020.101-0.1950.596-1.363
030.329-1.3630.2220.101
04-0.036-2.1710.868-0.617
05-0.922-0.9221.081-1.363
06-0.384-2.1711.128-2.171
07-2.171-2.1711.297-2.171
08-2.171-2.1711.297-2.171
09-1.3630.7410.426-2.171
10-0.0360.329-1.3630.329
11-1.3630.4260.1010.101
12-0.617-0.036-0.1950.515
130.596-0.036-0.384-0.617