Model info
Transcription factorNKX2-8
ModelNKX28_HUMAN.H10MO.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length9
Quality
C
ConsensusbTCAAGGAb
wAUC
Best AUC
Benchmark datasets
Aligned words6
TF familyNK-related factors{3.1.2}
TF subfamilyNK-2.2{3.1.2.15}
HGNC16364
EntrezGene26257
UniProt IDNKX28_HUMAN
UniProt ACO15522
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 5.027
0.0005 5.4972
0.0001 6.8525
PCM
ACGT
010.1471.2061.2063.441
020.00.00.06.0
030.04.6471.3530.0
045.7060.00.2940.0
056.00.00.00.0
060.00.06.00.0
070.00.03.5882.412
083.5880.02.4120.0
090.1473.4411.2061.206
PWM
ACGT
01-1.186-0.164-0.1640.691
02-1.47-1.47-1.471.197
03-1.470.961-0.078-1.47
041.15-1.47-0.965-1.47
051.197-1.47-1.47-1.47
06-1.47-1.471.197-1.47
07-1.47-1.470.7290.384
080.729-1.470.384-1.47
09-1.1860.691-0.164-0.164