Model info
Transcription factorNfya
ModelNFYA_MOUSE.H10MO.S
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length13
Quality
S
ConsensushbSYSATTGGYYv
wAUC
0.6207241796019873
Best AUC
0.6207241796019873
Benchmark datasets1
Aligned words1318
TF familyHeteromeric CCAAT-binding factors{4.2.1}
TF subfamilyNF-YA (CP1A, CBF-B){4.2.1.0.1}
MGI97316
EntrezGene18044
UniProt IDNFYA_MOUSE
UniProt ACP23708
CommentSecondary motif.
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 3.6111
0.0005 4.7661
0.0001 7.2551
PCM
ACGT
01193.111528.01786.025501.588
0291.124244.267438.696534.653
0390.638836.818230.342150.942
0419.019401.80770.497817.417
0564.87388.461742.598112.811
061278.26310.6337.53412.311
073.7965.7576.3561292.833
0812.0353.586.0761287.05
090.7674.1081294.6589.207
103.57716.8531287.4820.829
1189.379665.36672.097481.898
1250.84511.922114.318631.659
13358.965270.482555.212124.082
PWM
ACGT
01-0.5230.477-1.3210.425
02-1.264-0.290.2920.489
03-1.270.936-0.349-0.767
04-2.760.204-1.5150.912
05-1.5960.1710.817-1.054
061.359-3.276-3.563-3.149
07-4.075-3.774-3.6981.37
08-3.169-4.114-3.7331.366
09-4.855-4.0211.371-3.398
10-4.115-2.871.366-4.832
11-1.2830.707-1.4930.385
12-1.8330.446-1.0410.655
130.092-0.1890.527-0.961