Model info
Transcription factorNfkb2
ModelNFKB2_MOUSE.H10MO.D
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length11
Quality
D
ConsensusbGAWWbYCCCW
wAUC
Best AUC
Benchmark datasets
Aligned words11
TF familyNF-kappaB-related factors{6.1.1}
TF subfamilyNF-kappaB p50 subunit-like factors{6.1.1.1}
MGI1099800
EntrezGene18034
UniProt IDNFKB2_MOUSE
UniProt ACQ9WTK5
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.9561
0.0005 5.5651
0.0001 6.8072
PCM
ACGT
010.02.1466.7072.146
024.2930.06.7070.0
039.9270.00.01.073
047.780.01.0732.146
052.1461.0730.07.78
061.0733.893.222.817
071.0733.890.06.037
080.09.9271.0730.0
091.0739.9270.00.0
101.7449.2560.00.0
112.4820.3351.4096.774
PWM
ACGT
01-1.721-0.1990.78-0.199
020.379-1.7210.78-1.721
031.145-1.721-1.721-0.694
040.917-1.721-0.694-0.199
05-0.199-0.694-1.7210.917
06-0.6940.2930.1310.02
07-0.6940.293-1.7210.684
08-1.7211.145-0.694-1.721
09-0.6941.145-1.721-1.721
10-0.3571.079-1.721-1.721
11-0.083-1.276-0.5120.789