Model info
| Transcription factor | Myog | ||||||||
| Model | MYOG_MOUSE.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 11 | ||||||||
| Quality | C | ||||||||
| Consensus | vvvRRCAGCTG | ||||||||
| wAUC | 0.936904934324688 | ||||||||
| Best AUC | 0.936904934324688 | ||||||||
| Benchmark datasets | 1 | ||||||||
| Aligned words | 500 | ||||||||
| TF family | MyoD / ASC-related factors{1.2.2} | ||||||||
| TF subfamily | Myogenic transcription factors{1.2.2.1} | ||||||||
| MGI | 97276 | ||||||||
| EntrezGene | 17928 | ||||||||
| UniProt ID | MYOG_MOUSE | ||||||||
| UniProt AC | P12979 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 182.088 | 80.071 | 186.61 | 51.231 |
| 02 | 113.168 | 112.99 | 255.172 | 18.67 |
| 03 | 119.498 | 150.488 | 175.241 | 54.773 |
| 04 | 326.498 | 7.655 | 164.704 | 1.143 |
| 05 | 262.663 | 3.892 | 230.515 | 2.929 |
| 06 | 0.0 | 500.0 | 0.0 | 0.0 |
| 07 | 497.055 | 0.0 | 0.0 | 2.945 |
| 08 | 1.96 | 2.717 | 494.433 | 0.89 |
| 09 | 0.911 | 472.809 | 20.659 | 5.621 |
| 10 | 0.88 | 0.0 | 0.894 | 498.225 |
| 11 | 0.0 | 0.0 | 500.0 | 0.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.372 | -0.439 | 0.397 | -0.874 |
| 02 | -0.098 | -0.1 | 0.707 | -1.834 |
| 03 | -0.044 | 0.183 | 0.334 | -0.809 |
| 04 | 0.953 | -2.62 | 0.273 | -3.849 |
| 05 | 0.736 | -3.146 | 0.606 | -3.34 |
| 06 | -4.4 | 1.377 | -4.4 | -4.4 |
| 07 | 1.371 | -4.4 | -4.4 | -3.337 |
| 08 | -3.584 | -3.389 | 1.366 | -3.947 |
| 09 | -3.938 | 1.321 | -1.74 | -2.87 |
| 10 | -3.951 | -4.4 | -3.945 | 1.373 |
| 11 | -4.4 | -4.4 | 1.377 | -4.4 |