Model info
Transcription factorLEF1
ModelLEF1_HUMAN.H10MO.C
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length7
Quality
C
ConsensusCTTTGWW
wAUC
Best AUC
Benchmark datasets
Aligned words67
TF familyTCF-7-related factors{4.1.3}
TF subfamilyLEF-1 (TCF-1alpha) [1]{4.1.3.0.4}
HGNC6551
EntrezGene51176
UniProt IDLEF1_HUMAN
UniProt ACQ9UJU2
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.5527
0.0005 5.4887
0.0001 7.9487
PCM
ACGT
010.25163.8722.370.251
021.0041.1150.064.625
030.00.00.066.744
040.00.00.066.744
050.00.066.7440.0
0634.5153.7920.028.437
0724.1442.2862.28638.028
PWM
ACGT
01-2.6121.298-1.646-2.612
02-2.156-2.103-2.8271.309
03-2.827-2.827-2.8271.341
04-2.827-2.827-2.8271.341
05-2.827-2.8271.341-2.827
060.696-1.298-2.8270.508
070.351-1.671-1.6710.79