Model info
| Transcription factor | KLF4 | ||||||||
| Model | KLF4_HUMAN.H10MO.A | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HOCOMOCO v9 | ||||||||
| Model length | 10 | ||||||||
| Quality | A | ||||||||
| Consensus | dGGGYGKGGY | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 4389 | ||||||||
| TF family | Three-zinc finger Krüppel-related factors{2.3.1} | ||||||||
| TF subfamily | Krüppel-like factors{2.3.1.2} | ||||||||
| HGNC | 6348 | ||||||||
| EntrezGene | 9314 | ||||||||
| UniProt ID | KLF4_HUMAN | ||||||||
| UniProt AC | O43474 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 1233.461 | 93.182 | 1036.601 | 1258.295 |
| 02 | 263.979 | 5.315 | 3347.595 | 4.65 |
| 03 | 76.77 | 6.643 | 3529.49 | 8.636 |
| 04 | 57.861 | 18.103 | 3520.334 | 25.241 |
| 05 | 518.195 | 1545.906 | 22.397 | 1535.041 |
| 06 | 137.982 | 9.3 | 3456.321 | 17.937 |
| 07 | 115.276 | 81.518 | 1861.943 | 1562.802 |
| 08 | 227.81 | 42.846 | 3278.64 | 72.244 |
| 09 | 108.734 | 134.473 | 3162.88 | 215.451 |
| 10 | 238.496 | 2225.956 | 402.407 | 754.679 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.309 | -2.254 | 0.135 | 0.329 |
| 02 | -1.227 | -4.814 | 1.306 | -4.909 |
| 03 | -2.443 | -4.648 | 1.359 | -4.442 |
| 04 | -2.718 | -3.807 | 1.356 | -3.504 |
| 05 | -0.556 | 0.534 | -3.614 | 0.527 |
| 06 | -1.869 | -4.381 | 1.338 | -3.816 |
| 07 | -2.046 | -2.385 | 0.72 | 0.545 |
| 08 | -1.373 | -3.006 | 1.285 | -2.503 |
| 09 | -2.103 | -1.894 | 1.249 | -1.428 |
| 10 | -1.328 | 0.898 | -0.808 | -0.182 |