Model info
| Transcription factor | Tcf12 | ||||||||
| Model | HTF4_MOUSE.H10MO.C | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | ChIP-Seq | ||||||||
| Model length | 11 | ||||||||
| Quality | C | ||||||||
| Consensus | vvvRRCAGCTG | ||||||||
| wAUC | 0.9279493092210841 | ||||||||
| Best AUC | 0.927949309221084 | ||||||||
| Benchmark datasets | 1 | ||||||||
| Aligned words | 501 | ||||||||
| TF family | E2A-related factors{1.2.1} | ||||||||
| TF subfamily | HTF-4 (TCF-12, HEB){1.2.1.0.3} | ||||||||
| MGI | 101877 | ||||||||
| EntrezGene | 21406 | ||||||||
| UniProt ID | HTF4_MOUSE | ||||||||
| UniProt AC | Q61286 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 179.973 | 89.827 | 166.291 | 63.908 |
| 02 | 136.637 | 68.192 | 260.851 | 34.32 |
| 03 | 123.672 | 165.476 | 172.263 | 38.589 |
| 04 | 328.37 | 35.06 | 135.514 | 1.056 |
| 05 | 293.338 | 9.643 | 197.019 | 0.0 |
| 06 | 0.0 | 499.092 | 0.0 | 0.908 |
| 07 | 500.0 | 0.0 | 0.0 | 0.0 |
| 08 | 0.0 | 1.016 | 498.984 | 0.0 |
| 09 | 11.691 | 419.599 | 66.888 | 1.822 |
| 10 | 0.879 | 0.0 | 0.0 | 499.121 |
| 11 | 0.0 | 1.839 | 498.161 | 0.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.361 | -0.326 | 0.282 | -0.659 |
| 02 | 0.088 | -0.596 | 0.729 | -1.261 |
| 03 | -0.011 | 0.278 | 0.317 | -1.148 |
| 04 | 0.958 | -1.24 | 0.08 | -3.881 |
| 05 | 0.846 | -2.425 | 0.45 | -4.4 |
| 06 | -4.4 | 1.375 | -4.4 | -3.94 |
| 07 | 1.377 | -4.4 | -4.4 | -4.4 |
| 08 | -4.4 | -3.897 | 1.375 | -4.4 |
| 09 | -2.257 | 1.202 | -0.615 | -3.624 |
| 10 | -3.952 | -4.4 | -4.4 | 1.375 |
| 11 | -4.4 | -3.619 | 1.373 | -4.4 |