Model info
| Transcription factor | HSFY1; HSFY2 | ||||||||
| Model | HSFY1_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 12 | ||||||||
| Quality | D | ||||||||
| Consensus | dWTMGAACGhdW | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 6657 | ||||||||
| TF family | HSF factors{3.4.1} | ||||||||
| TF subfamily | HSFY1 (HSFY2, HSF2L){3.4.1.0.6} | ||||||||
| HGNC | 18568; 23950 | ||||||||
| EntrezGene | 159119; 86614 | ||||||||
| UniProt ID | HSFY1_HUMAN | ||||||||
| UniProt AC | Q96LI6 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 3259.0 | 648.0 | 851.0 | 1898.0 |
| 02 | 2297.0 | 71.0 | 332.0 | 3956.0 |
| 03 | 589.25 | 52.25 | 55.25 | 5959.25 |
| 04 | 1366.25 | 4860.25 | 424.25 | 5.25 |
| 05 | 0.0 | 0.0 | 6656.0 | 0.0 |
| 06 | 6655.0 | 0.0 | 0.0 | 1.0 |
| 07 | 6638.0 | 0.0 | 14.0 | 4.0 |
| 08 | 10.0 | 5008.0 | 1.0 | 1637.0 |
| 09 | 101.75 | 265.75 | 6111.75 | 176.75 |
| 10 | 2281.75 | 1081.75 | 429.75 | 2862.75 |
| 11 | 2824.5 | 334.5 | 684.5 | 2812.5 |
| 12 | 1914.25 | 543.25 | 493.25 | 3705.25 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.672 | -0.941 | -0.669 | 0.131 |
| 02 | 0.322 | -3.125 | -1.607 | 0.865 |
| 03 | -1.036 | -3.421 | -3.367 | 1.275 |
| 04 | -0.197 | 1.071 | -1.363 | -5.41 |
| 05 | -6.629 | -6.629 | 1.385 | -6.629 |
| 06 | 1.385 | -6.629 | -6.629 | -6.255 |
| 07 | 1.383 | -6.629 | -4.633 | -5.594 |
| 08 | -4.917 | 1.101 | -6.255 | -0.016 |
| 09 | -2.774 | -1.827 | 1.3 | -2.231 |
| 10 | 0.315 | -0.43 | -1.35 | 0.542 |
| 11 | 0.529 | -1.599 | -0.886 | 0.524 |
| 12 | 0.14 | -1.117 | -1.213 | 0.8 |