Model info
| Transcription factor | HIC2 | ||||||||
| Model | HIC2_HUMAN.H10MO.D | ||||||||
| Model type | Mononucleotide PWM | ||||||||
| LOGO |  | ||||||||
| LOGO (reverse complement) |  | ||||||||
| Origin | HT-SELEX | ||||||||
| Model length | 11 | ||||||||
| Quality | D | ||||||||
| Consensus | nhRTGCCAGnn | ||||||||
| wAUC | |||||||||
| Best AUC | |||||||||
| Benchmark datasets | |||||||||
| Aligned words | 134 | ||||||||
| TF family | Factors with multiple dispersed zinc fingers{2.3.4} | ||||||||
| TF subfamily | Hypermethylated in Cancer proteins{2.3.4.17} | ||||||||
| HGNC | 18595 | ||||||||
| EntrezGene | 23119 | ||||||||
| UniProt ID | HIC2_HUMAN | ||||||||
| UniProt AC | Q96JB3 | ||||||||
| Comment | |||||||||
| Downloads | pcm
pwm alignment threshold to P-value grid | ||||||||
| Standard thresholds |
|
PCM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 46.0 | 46.0 | 13.0 | 29.0 |
| 02 | 27.5 | 63.5 | 12.5 | 30.5 |
| 03 | 67.5 | 1.5 | 64.5 | 0.5 |
| 04 | 0.0 | 0.0 | 0.0 | 134.0 |
| 05 | 0.0 | 0.0 | 134.0 | 0.0 |
| 06 | 0.0 | 134.0 | 0.0 | 0.0 |
| 07 | 0.0 | 134.0 | 0.0 | 0.0 |
| 08 | 105.0 | 29.0 | 0.0 | 0.0 |
| 09 | 6.75 | 14.75 | 111.75 | 0.75 |
| 10 | 26.0 | 41.0 | 45.0 | 22.0 |
| 11 | 33.0 | 38.0 | 30.0 | 33.0 |
PWM
| A | C | G | T | |
|---|---|---|---|---|
| 01 | 0.307 | 0.307 | -0.892 | -0.139 |
| 02 | -0.19 | 0.623 | -0.928 | -0.09 |
| 03 | 0.683 | -2.545 | 0.638 | -3.003 |
| 04 | -3.345 | -3.345 | -3.345 | 1.359 |
| 05 | -3.345 | -3.345 | 1.359 | -3.345 |
| 06 | -3.345 | 1.359 | -3.345 | -3.345 |
| 07 | -3.345 | 1.359 | -3.345 | -3.345 |
| 08 | 1.118 | -0.139 | -3.345 | -3.345 |
| 09 | -1.471 | -0.776 | 1.18 | -2.867 |
| 10 | -0.243 | 0.196 | 0.286 | -0.402 |
| 11 | -0.015 | 0.122 | -0.106 | -0.015 |