Model info
Transcription factorGABPA
ModelGABPA_HUMAN.H10MO.A
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length13
Quality
A
ConsensusvvvCCGGAAGYSv
wAUC
0.9075331433433343
Best AUC
0.9510419004368058
Benchmark datasets14
Aligned words2926
TF familyEts-related factors{3.5.2}
TF subfamilyEts-like factors{3.5.2.1}
HGNC4071
EntrezGene2551
UniProt IDGABPA_HUMAN
UniProt ACQ06546
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 2.3421
0.0005 3.8851
0.0001 7.0041
PCM
ACGT
01615.257697.071261.19176.435
02996.493805.188693.77254.502
031106.989508.1941029.833104.936
04143.7122086.428518.3751.437
05362.9542369.47417.2370.287
060.00.02749.9530.0
070.00.02749.9530.0
082748.2571.6960.00.0
092726.6481.151.1521.004
10202.05728.7992518.8090.287
11172.929521.124106.3821949.518
12398.168424.2091706.402221.173
13764.259675.0881066.541244.064
PWM
ACGT
01-0.1110.0140.605-1.352
020.370.1580.009-0.989
030.475-0.3010.403-1.864
04-1.5541.108-0.281-5.307
05-0.6361.235-3.58-5.717
06-5.853-5.8531.384-5.853
07-5.853-5.8531.384-5.853
081.384-5.234-5.853-5.853
091.376-5.395-5.395-3.401
10-1.218-3.1091.296-5.717
11-1.372-0.276-1.851.04
12-0.544-0.4810.907-1.128
130.106-0.0180.438-1.03