Model info
Transcription factorNR2F1
ModelCOT1_HUMAN.H10MO.B
Model typeMononucleotide PWM
LOGO
LOGO (reverse complement)
OriginHOCOMOCO v9
Model length9
Quality
B
ConsensusYWRAGGTCA
wAUC
Best AUC
Benchmark datasets
Aligned words86
TF familyRXR-related receptors (NR2){2.1.3}
TF subfamilyCOUP-like receptors (NR2F){2.1.3.5}
HGNC7975
EntrezGene7025
UniProt IDCOT1_HUMAN
UniProt ACP10589
Comment
Downloadspcm
pwm
alignment
threshold to P-value grid
Standard thresholds
P-value
Threshold
0.001 4.8724
0.0005 5.7123
0.0001 7.1529
PCM
ACGT
018.07352.9717.15614.966
0257.0438.978.0949.058
0354.6194.17217.6156.759
0466.840.016.3260.0
050.7510.082.4150.0
060.00.063.32319.843
070.7517.1392.33672.939
080.83475.610.7515.97
0970.627.083.7761.69
PWM
ACGT
01-0.8690.904-0.975-0.309
020.977-0.776-0.867-0.768
030.934-1.423-0.157-1.024
041.132-2.986-0.228-2.986
05-2.468-2.9861.339-2.986
06-2.986-2.9861.079-0.044
07-2.468-0.977-1.851.218
08-2.4241.254-2.468-1.13
091.187-0.984-1.501-2.058