COE1_HUMAN.H10DI.A motif - HOmo sapiens COmprehensive MOdel COllection

Model info

Transcription factor

EBF1

Model

COE1_HUMAN.H10DI.A

Model type

Dinucleotide PWM

LOGO

LOGO (reverse complement)

Origin

ChIP-Seq

Model length

16

Quality

A

Consensus

ndbYCCCWRGGGAvhn

wAUC

0.8608839163528562

Best AUC

0.9249900857816359

Benchmark datasets

3

Aligned words

503

TF family

Early B-Cell Factor-related factors{6.1.5}

TF subfamily

EBF1 (COE1){6.1.5.0.1}

HGNC

3126

EntrezGene

1879

UniProt ID

COE1_HUMAN

UniProt AC

Q9UH73

Comment

Downloads

pcm
pwm
alignment
threshold to P-value grid

Standard thresholds

P-value	Threshold
0.001	5.3301
0.0005	7.7801
0.0001	12.9701

PCM

	AA	AC	AG	AT	CA	CC	CG	CT	GA	GC	GG	GT	TA	TC	TG	TT
01	63.179	13.68	45.608	23.808	64.711	27.414	15.074	34.299	32.656	11.282	36.752	18.418	31.691	6.915	51.601	22.913
02	24.316	30.374	80.022	57.525	13.625	25.521	1.858	18.287	6.928	30.831	82.139	29.136	4.764	21.789	40.524	32.361
03	0.965	8.962	2.668	37.037	4.078	31.76	0.0	72.676	6.746	73.469	16.883	107.445	7.458	48.388	6.032	75.431
04	0.0	19.247	0.0	0.0	0.974	161.606	0.0	0.0	0.0	25.584	0.0	0.0	0.0	290.73	1.859	0.0
05	0.0	0.974	0.0	0.0	5.723	385.701	0.0	105.743	0.0	1.859	0.0	0.0	0.0	0.0	0.0	0.0
06	2.041	3.682	0.0	0.0	3.14	377.61	0.0	7.785	0.0	0.0	0.0	0.0	0.0	102.381	1.682	1.68
07	1.009	0.0	2.081	2.09	256.767	6.914	7.656	212.335	0.837	0.0	0.0	0.845	1.68	0.0	1.895	5.89
08	84.929	7.733	146.373	21.258	0.0	0.0	6.914	0.0	1.967	0.0	9.666	0.0	32.152	0.0	189.008	0.0
09	0.0	0.0	119.048	0.0	1.069	0.0	6.664	0.0	5.224	0.0	345.755	0.983	0.0	0.0	21.258	0.0
10	0.905	0.0	4.397	0.99	0.0	0.0	0.0	0.0	60.092	0.933	431.7	0.0	0.0	0.0	0.0	0.983
11	1.084	1.622	58.292	0.0	0.0	0.933	0.0	0.0	0.0	4.635	430.63	0.833	0.0	0.983	0.99	0.0
12	1.084	0.0	0.0	0.0	6.437	0.0	1.734	0.0	405.653	1.93	69.92	12.409	0.833	0.0	0.0	0.0
13	79.028	179.346	130.353	25.28	0.974	0.956	0.0	0.0	20.686	30.667	16.657	3.644	1.645	3.342	7.422	0.0
14	23.227	22.652	2.632	53.821	56.247	71.935	17.294	68.835	28.074	67.046	20.969	38.342	1.953	6.76	3.559	16.652
15	27.541	22.556	34.181	25.223	45.478	45.324	8.018	69.574	11.815	11.584	14.524	6.532	32.809	37.789	48.436	58.616

PWM

	AA	AC	AG	AT	CA	CC	CG	CT	GA	GC	GG	GT	TA	TC	TG	TT
01	0.698	-0.81	0.374	-0.268	0.722	-0.129	-0.716	0.092	0.043	-0.997	0.16	-0.52	0.014	-1.466	0.497	-0.306
02	-0.247	-0.028	0.933	0.605	-0.814	-0.2	-2.645	-0.527	-1.464	-0.013	0.959	-0.069	-1.815	-0.355	0.257	0.035
03	-3.152	-1.219	-2.337	0.168	-1.958	0.016	-4.4	0.837	-1.489	0.848	-0.605	1.226	-1.394	0.433	-1.595	0.874
04	-4.4	-0.477	-4.4	-4.4	-3.145	1.633	-4.4	-4.4	-4.4	-0.197	-4.4	-4.4	-4.4	2.219	-2.644	-4.4
05	-4.4	-3.145	-4.4	-4.4	-1.644	2.502	-4.4	1.21	-4.4	-2.644	-4.4	-4.4	-4.4	-4.4	-4.4	-4.4
06	-2.567	-2.051	-4.4	-4.4	-2.194	2.481	-4.4	-1.353	-4.4	-4.4	-4.4	-4.4	-4.4	1.178	-2.726	-2.728
07	-3.12	-4.4	-2.55	-2.547	2.095	-1.466	-1.369	1.906	-3.251	-4.4	-4.4	-3.245	-2.728	-4.4	-2.629	-1.617
08	0.992	-1.36	1.534	-0.38	-4.4	-4.4	-1.466	-4.4	-2.598	-4.4	-1.146	-4.4	0.028	-4.4	1.789	-4.4
09	-4.4	-4.4	1.328	-4.4	-3.078	-4.4	-1.501	-4.4	-1.729	-4.4	2.392	-3.139	-4.4	-4.4	-0.38	-4.4
10	-3.197	-4.4	-1.889	-3.134	-4.4	-4.4	-4.4	-4.4	0.648	-3.176	2.614	-4.4	-4.4	-4.4	-4.4	-3.139
11	-3.068	-2.756	0.618	-4.4	-4.4	-3.176	-4.4	-4.4	-4.4	-1.84	2.612	-3.255	-4.4	-3.139	-3.134	-4.4
12	-3.068	-4.4	-4.4	-4.4	-1.534	-4.4	-2.702	-4.4	2.552	-2.614	0.799	-0.905	-3.255	-4.4	-4.4	-4.4
13	0.92	1.737	1.419	-0.209	-3.145	-3.158	-4.4	-4.4	-0.406	-0.019	-0.618	-2.06	-2.745	-2.138	-1.399	-4.4
14	-0.292	-0.317	-2.349	0.538	0.582	0.827	-0.582	0.783	-0.106	0.757	-0.393	0.202	-2.604	-1.487	-2.081	-0.619
15	-0.125	-0.321	0.089	-0.211	0.371	0.368	-1.325	0.794	-0.953	-0.972	-0.752	-1.52	0.048	0.188	0.434	0.623